RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 UQCRHLA0A096LP55 91 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 URADA6NGE7 173 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 H0YIG0 161 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 PRPF4O43172 522 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHMT2-225ENST00000556798 ERI3O43414 337 aaKnown RBP16.57■□□□□ 0.24
SHMT2-225ENST00000556798 GALR3O60755 368 aaPredicted RBP16.57■□□□□ 0.24
SHMT2-225ENST00000556798 DNAJB6O75190 326 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 CREG1O75629 220 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 TGFB1P01137 390 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 UQCRHP07919 91 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 FURINP09958 794 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 NEK2P51955 445 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 CDC20Q12834 499 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 GGTA1PQ4G0N0 100 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 VWA2Q5GFL6 755 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 CFAP157Q5JU67 520 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 TCHHL1Q5QJ38 904 aaPredicted RBP16.57■□□□□ 0.24
SHMT2-225ENST00000556798 FRMD7Q6ZUT3 714 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 GPRIN3Q6ZVF9 776 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 CDYL2Q8N8U2 506 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 WDR20Q8TBZ3 569 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 REPS1Q96D71 796 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 MTFMTQ96DP5 389 aaKnown RBP16.57■□□□□ 0.24
SHMT2-225ENST00000556798 PKNOX2Q96KN3 472 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 ZNF382Q96SR6 550 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 SPSB2Q99619 263 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 REXO4Q9GZR2 422 aaKnown RBP16.57■□□□□ 0.24
SHMT2-225ENST00000556798 OR51B5Q9H339 312 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 KCNK9Q9NPC2 374 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 ZNF282Q9UDV7 671 aaPredicted RBP16.57■□□□□ 0.24
SHMT2-225ENST00000556798 TRPS1Q9UHF7 1281 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 ACTL7BQ9Y614 415 aa16.57■□□□□ 0.24
SHMT2-225ENST00000556798 CDC14CA4D256 554 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 MAGEB17A8MXT2 336 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 SAP18O00422 153 aaKnown RBP16.56■□□□□ 0.24
SHMT2-225ENST00000556798 UBFD1O14562 309 aaKnown RBP16.56■□□□□ 0.24
SHMT2-225ENST00000556798 TRIM13O60858 407 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 MLYCDO95822 493 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 ALBP02768 609 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 SMIM10L1P0DMW3 83 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 SERPINB1P30740 379 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 FOLR3P41439 243 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 ETV4P43268 484 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 PLA2G16P53816 162 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 MAGOHP61326 146 aaKnown RBP16.56■□□□□ 0.24
SHMT2-225ENST00000556798 RPS13P62277 151 aaKnown RBP16.56■□□□□ 0.24
SHMT2-225ENST00000556798 OCA2Q04671 838 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 MPP2Q14168 576 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 ADPRMQ3LIE5 342 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 SGO1Q5FBB7 561 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 TTC19Q6DKK2 380 aaPredicted RBP16.56■□□□□ 0.24
SHMT2-225ENST00000556798 OR2L5Q8NG80 312 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 OR2Y1Q8NGV0 311 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 STT3BQ8TCJ2 826 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 AGAP11Q8TF27 550 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 ARL8AQ96BM9 186 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 SMIM10Q96HG1 83 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 KCNA7Q96RP8 456 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 GATA5Q9BWX5 397 aaPredicted RBP16.56■□□□□ 0.24
SHMT2-225ENST00000556798 RBCK1Q9BYM8 510 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 SLC26A1Q9H2B4 701 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 PRORYQ9H606 182 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 MID1IP1Q9NPA3 183 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 MAP4K5Q9Y4K4 846 aa16.56■□□□□ 0.24
SHMT2-225ENST00000556798 WDR91A4D1P6 747 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 RTCAO00442 366 aaKnown RBP16.55■□□□□ 0.24
SHMT2-225ENST00000556798 BPGMP07738 259 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 OTX2P32243 289 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 PIK3CBP42338 1070 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 BTN3A2P78410 334 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 PHEXP78562 749 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 FRG2Q64ET8 278 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 TRIM40Q6P9F5 258 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 ZCCHC23Q6ZST2 131 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 ZC3H7AQ8IWR0 971 aaKnown RBP16.55■□□□□ 0.24
SHMT2-225ENST00000556798 OR51Q1Q8NH59 317 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 MIEF2Q96C03 454 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 TLCD1Q96CP7 247 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 CMTM7Q96FZ5 175 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 FAR2Q96K12 515 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 FRG2BQ96QU4 278 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 SORBS1Q9BX66 1292 aaKnown RBP16.55■□□□□ 0.24
SHMT2-225ENST00000556798 SHCBP1LQ9BZQ2 653 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 ELOVL6Q9H5J4 265 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 WDR54Q9H977 334 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 MLXIPLQ9NP71 852 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 MKKSQ9NPJ1 570 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-225ENST00000556798 FARSBQ9NSD9 589 aaKnown RBP16.55■□□□□ 0.24
SHMT2-225ENST00000556798 ADGRE2Q9UHX3 823 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 TSC22D4Q9Y3Q8 395 aa16.55■□□□□ 0.24
SHMT2-225ENST00000556798 IGLV3-12A0A075B6K2 115 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 VSTM2BA6NLU5 285 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 TM9SF1O15321 606 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 JRKO75564 520 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 SASH3O75995 380 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 ETHE1O95571 254 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 UMODP07911 640 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 ZGLP1P0C6A0 271 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 CERS1P27544 350 aa16.54■□□□□ 0.24
SHMT2-225ENST00000556798 XCR1P46094 333 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms