RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PAQR7Q86WK9 346 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CPNE8Q86YQ8 564 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 ZC3H7AQ8IWR0 971 aaKnown RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 SLC5A8Q8N695 610 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CLDN19Q8N6F1 224 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 AMER3Q8N944 861 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 LMNTD1Q8N9Z9 388 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 IPMKQ8NFU5 416 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 OR5M3Q8NGP4 307 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 C16orf52Q8NHV5 167 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 FAM222BQ8WU58 562 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 ELMO1Q92556 727 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 MMABQ96EY8 250 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 OXNAD1Q96HP4 312 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CABS1Q96KC9 395 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 IL17FQ96PD4 163 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 FCRL5Q96RD9 977 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 FICDQ9BVA6 458 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 MAK16Q9BXY0 300 aaKnown RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 PLEKHF2Q9H8W4 249 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 TRIM45Q9H8W5 580 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 MMP25Q9NPA2 562 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 DMRT3Q9NQL9 472 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 AIPL1Q9NZN9 384 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 C19orf25Q9UFG5 118 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CBLCQ9ULV8 474 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 TFR2Q9UP52 801 aa6.42□□□□□ -1.38
ATXN3-236ENST00000556220 HRNRQ86YZ3 2850 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-236ENST00000556220 CPAMD8Q8IZJ3 1885 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 TRBV5-4A0A0C4DH59 114 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 LRRC53A6NM62 1247 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 H0YGG7 62 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 H7C1Q1 480 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 APOL1O14791 398 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 FOXS1O43638 330 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 HS6ST1O60243 411 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 PDE9AO76083 593 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 AGTP01019 485 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 CYP1A2P05177 515 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 CYC1P08574 325 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 ERVK-10P10266 1014 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 ZFXP17010 805 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-236ENST00000556220 CD53P19397 219 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 ACRV1P26436 265 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 PRKCIP41743 596 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 ARHGAP25P42331 645 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 TAS2R40P59535 323 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 ARF3P61204 181 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-236ENST00000556220 WASHC5Q12768 1159 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 MSLNQ13421 630 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-236ENST00000556220 GRB7Q14451 532 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 SYT16Q17RD7 645 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 VMACQ2NL98 169 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 FLYWCH1Q4VC44 716 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 DNAJC21Q5F1R6 531 aaKnown RBP6.41□□□□□ -1.38
ATXN3-236ENST00000556220 FIGNQ5HY92 759 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 GARNL3Q5VVW2 1013 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 PAQR3Q6TCH7 311 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 RAD9BQ6WBX8 426 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 LANCL3Q6ZV70 420 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 RNF44Q7L0R7 432 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 TAX1BP1Q86VP1 789 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 SERPINA9Q86WD7 417 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 ZNF227Q86WZ6 799 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 CXorf67Q86X51 503 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-236ENST00000556220 LGI4Q8N135 537 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 OR52N2Q8NGI0 321 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 OR13C4Q8NGS5 318 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 OR2L8Q8NGY9 312 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-236ENST00000556220 C19orf43Q9BQ61 176 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 TTYH2Q9BSA4 534 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 BDH2Q9BUT1 245 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 TRIM5Q9C035 493 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 VN1R1Q9GZP7 353 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 CDCP1Q9H5V8 836 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 TRPS1Q9UHF7 1281 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 PRSS21Q9Y6M0 314 aa6.41□□□□□ -1.38
ATXN3-236ENST00000556220 A0A0A6YYC8 382 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 A0A0G2JNJ9 132 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 OR2A25A4D2G3 310 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 ZNF487B1APH4 448 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 NPIPA2E9PIF3 369 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 NPIPA3F8WFD2 350 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 KLRC4-KLRK1H3BQV0 150 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 I3L1I5 382 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 CCL22O00626 93 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 NDC80O14777 642 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 SMAD7O15105 426 aaKnown RBP6.4□□□□□ -1.38
ATXN3-236ENST00000556220 NRP2O60462 931 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 CRLF1O75462 422 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 PROSCO94903 275 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 CRTAMO95727 393 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 FTH1P02794 183 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 PRSS56P0CW18 603 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 GLI4P10075 376 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 SKILP12757 684 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 ACVR2AP27037 513 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 MC4RP32245 332 aa6.4□□□□□ -1.38
ATXN3-236ENST00000556220 RFC3P40938 356 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms