RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TIMM22Q9Y584 194 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 SPACA6W5XKT8 324 aa7.26□□□□□ -1.25
TDP1-214ENST00000556063 FRYLO94915 3013 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 A0A0A6YYC8 382 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 A0A1B0GTL3 188 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ARHGAP10A1A4S6 786 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 SERTM1A2A2V5 107 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 TMEM8BA6NDV4 472 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 C21orf140B9A014 251 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 I3L1I5 382 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 PSMD12O00232 456 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 GALR3O60755 368 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 GUCY1B2O75343 617 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 LYPLA1O75608 230 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 MYO1DO94832 1006 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ONECUT2O95948 504 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 PDYNP01213 254 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ALBP02768 609 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 CTSBP07858 339 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ZNF888P0CJ79 500 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 ZNF28P17035 718 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 IL1RNP18510 177 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ITGAXP20702 1163 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 FBLP22087 321 aaKnown RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 IL10P22301 178 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 SERPINB3P29508 390 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 RORAP35398 523 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 SSR2P43308 183 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 CCR10P46092 362 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 GCGRP47871 477 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 PLA2G16P53816 162 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 RAB8AP61006 207 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 RPS15P62841 145 aaKnown RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 BTN3A2P78410 334 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 OCA2Q04671 838 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ACSM2AQ08AH3 577 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 DSG2Q14126 1118 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 DEFB134Q4QY38 66 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 SPDYAQ5MJ70 313 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 PRAMEF17Q5VTA0 474 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 C1orf189Q5VU69 101 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 KANK2Q63ZY3 851 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ACSM2BQ68CK6 577 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 CLEC6AQ6EIG7 209 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ABHD17CQ6PCB6 329 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 RGS9BPQ6ZS82 235 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 RNF165Q6ZSG1 346 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 TRIM46Q7Z4K8 759 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 VN1R5Q7Z5H4 357 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 NUDT13Q86X67 352 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ZFAND4Q86XD8 727 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 DDIASQ8IXT1 998 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 DSELQ8IZU8 1212 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 SNIP1Q8TAD8 396 aaKnown RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 AGR3Q8TD06 166 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 ADAMTS18Q8TE60 1221 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 UTP15Q8TED0 518 aaKnown RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 KCNE4Q8WWG9 221 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 CKAP2Q8WWK9 683 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 PMEPA1Q969W9 287 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 FKBP10Q96AY3 582 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 MMABQ96EY8 250 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 METTL2AQ96IZ6 378 aaKnown RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 C10orf90Q96M02 699 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 C7orf26Q96N11 449 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 GBP5Q96PP8 586 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 F2RL3Q96RI0 385 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 KCNA7Q96RP8 456 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 SERINC2Q96SA4 455 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 MACROD1Q9BQ69 325 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 YIPF2Q9BWQ6 316 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 NPLQ9BXD5 320 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 SPRY4Q9C004 299 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 LHX9Q9NQ69 397 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 WDR70Q9NW82 654 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 IFT80Q9P2H3 777 aaPredicted RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 TRPC4Q9UBN4 977 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 VTI1BQ9UEU0 232 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 HAO1Q9UJM8 370 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 KCND3Q9UK17 655 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 NXT1Q9UKK6 140 aaKnown RBP7.25□□□□□ -1.25
TDP1-214ENST00000556063 NAALAD2Q9Y3Q0 740 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 MAP4K5Q9Y4K4 846 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 CEP295Q9C0D2 2601 aa7.25□□□□□ -1.25
TDP1-214ENST00000556063 FER1L5A0AVI2 2057 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 TRPC5OSA6NMA1 111 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 RRP8O43159 456 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 FOXS1O43638 330 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 ITM2AO43736 263 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SNNO75324 88 aaPredicted RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 VPS4BO75351 444 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SH3BGRLO75368 114 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 RSL1D1O76021 490 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 RAB40ALP0C0E4 278 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SMIM10L1P0DMW3 83 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 RNH1P13489 461 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 TCN2P20062 427 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 HIST1H1TP22492 207 aaPredicted RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 JAK1P23458 1154 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 HNRNPH1P31943 449 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms