RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SLC7A8Q9UHI5 535 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 ZNF490Q9ULM2 529 aaPredicted RBP6.57□□□□□ -1.36
SLIRP-204ENST00000555890 FZD4Q9ULV1 537 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 SLC22A14Q9Y267 594 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 RNF11Q9Y3C5 154 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 GPR45Q9Y5Y3 372 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PTGDR2Q9Y5Y4 395 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 PCM1Q15154 2024 aa6.57□□□□□ -1.36
SLIRP-204ENST00000555890 CEP192Q8TEP8 1941 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3DA0A087WVF3 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3IA0A087WXS9 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3EA0A087X179 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3KA0A087X1G2 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 A0A1W2PP18 115 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 FAM234BA2RU67 622 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3FA6NER0 549 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TMEM202A6NGA9 273 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CCDC154A6NI56 674 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ZNF839A8K0R7 811 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3LB9A6J9 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 NR5A2O00482 541 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 FFAR3O14843 346 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 KMOO15229 486 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 GPR42O15529 346 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 PLRG1O43660 514 aaKnown RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 UGDHO60701 494 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 RNGTTO60942 597 aaKnown RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CBFA2T3O75081 653 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SEC22BO75396 215 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 DEAF1O75398 565 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 C1orf105O95561 183 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 PAK4O96013 591 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SCG5P05408 212 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3HP0C7X1 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ACADMP11310 421 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SLC2A4P14672 509 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 JUPP14923 745 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 NAT1P18440 290 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 GNAZP19086 355 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ME2P23368 584 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 PDHA2P29803 388 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 HSD17B2P37059 387 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 HNF4AP41235 474 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 HALP42357 657 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 HTR6P50406 440 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 POLR2JP52435 117 aaKnown RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 PNLIPRP1P54315 467 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 PFN3P60673 137 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 AP2B1P63010 937 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CDK3Q00526 305 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 IRF8Q02556 426 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CHIT1Q13231 466 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 NAE1Q13564 534 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 LRP8Q14114 963 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ABRAXAS2Q15018 415 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TESK1Q15569 626 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SF1Q15637 639 aaKnown RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CPSF6Q16630 551 aaKnown RBP eCLIP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ZXDCQ2QGD7 858 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SGO1Q5FBB7 561 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 COQ5Q5HYK3 327 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TCHHL1Q5QJ38 904 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CACHD1Q5VU97 1274 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 IL23RQ5VWK5 629 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 KIAA1614Q5VZ46 1190 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 LIPJQ5W064 366 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 REP15Q6BDI9 236 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3GQ6DHY5 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3CQ6IPX1 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CAPN13Q6MZZ7 669 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ZCCHC8Q6NZY4 707 aaKnown RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 DOK6Q6PKX4 331 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CRTC3Q6UUV7 619 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 Q6ZSR9 355 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 USP30Q70CQ3 517 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 UBE3DQ7Z6J8 389 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 THOC6Q86W42 341 aaKnown RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 HORMAD1Q86X24 394 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CACUL1Q86Y37 369 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 GALNT13Q8IUC8 556 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TBC1D3Q8IZP1 549 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SLC34A3Q8N130 599 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SFRP1Q8N474 314 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 FRMD1Q8N878 549 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 DCBLD1Q8N8Z6 715 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 L3MBTL4Q8NA19 623 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 IL17RCQ8NAC3 791 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 PLA2G15Q8NCC3 412 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 OR9A1PQ8NGU1 263 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 OR2I1PQ8NGU4 316 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 OR2T11Q8NH01 316 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 OR14C36Q8NHC7 312 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SETD7Q8WTS6 366 aaKnown RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 WDR60Q8WVS4 1066 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SELENOMQ8WWX9 145 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 JADE3Q92613 823 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 RAD51AP1Q96B01 352 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 REPS1Q96D71 796 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SIPA1Q96FS4 1042 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CLPTM1LQ96KA5 538 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms