RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	PRSS56	P0CW18	603 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	PRKAR1A	P10644	381 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	ALPPL2	P10696	532 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	RPL35A	P18077	110 aa	Known RBP	3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	OR3A2	P47893	321 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	HUNK	P57058	714 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	SP3	Q02447	781 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	GK2	Q14410	553 aa	Predicted RBP	3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	GRB14	Q14449	540 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	PDK1	Q15118	436 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	C9orf50	Q5SZB4	431 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	PSRC1	Q6PGN9	363 aa	Predicted RBP	3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	BTN2A1	Q7KYR7	527 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	TRMT11	Q7Z4G4	463 aa	Known RBP	3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	BATF2	Q8N1L9	274 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	FBXW8	Q8N3Y1	598 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	HDDC3	Q8N4P3	179 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	MRPL43	Q8N983	215 aa	Known RBP	3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	SIDT2	Q8NBJ9	832 aa	Known RBP	3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	TRIM58	Q8NG06	486 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	OR10G8	Q8NGN5	311 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	KIAA1524	Q8TCG1	905 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	GATAD1	Q8WUU5	269 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	GUCD1	Q96NT3	240 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	PKP2	Q99959	881 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	FSD1	Q9BTV5	496 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	TDRD1	Q9BXT4	1180 aa	Known RBP	3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	SYTL2	Q9HCH5	934 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	MAN2C1	Q9NTJ4	1040 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	NINJ2	Q9NZG7	142 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	HACD3	Q9P035	362 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	POLK	Q9UBT6	870 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	EPHA6	Q9UF33	1036 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	PSORS1C1	Q9UIG5	152 aa		3.85	□□□□□ -1.79
KTN1-222	ENST00000555506	SPATA31D1	Q6ZQQ2	1576 aa		3.84	□□□□□ -1.79
KTN1-222	ENST00000555506	CCDC69	A6NI79	296 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	SLC28A1	O00337	649 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	CHUK	O15111	745 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	MAGEB2	O15479	319 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	MLNR	O43193	412 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	PSMD3	O43242	534 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	SYT7	O43581	403 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	PRPSAP2	O60256	369 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	HSF2BP	O75031	334 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	KHDRBS3	O75525	346 aa	Known RBP	3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	STBD1	O95210	358 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	SLC4A1	P02730	911 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	CD48	P09326	243 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	NUDT17	P0C025	328 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	AREG	P15514	252 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	AADAC	P22760	399 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	SLC1A3	P43003	542 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	TNFSF10	P50591	281 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	TRA2A	Q13595	282 aa	Known RBP eCLIP	3.84	□□□□□ -1.8	3e-7	■■■■■ 31.7
KTN1-222	ENST00000555506	CEACAM7	Q14002	265 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	TMEM132D	Q14C87	1099 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	DUSP5	Q16690	384 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	TOR1AIP1	Q5JTV8	583 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	ZNF776	Q68DI1	518 aa	Predicted RBP	3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	C17orf107	Q6ZR85	190 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	LACC1	Q8IV20	430 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	APLF	Q8IW19	511 aa	Predicted RBP	3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	DCUN1D3	Q8IWE4	304 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	STH	Q8IWL8	128 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	LSMEM2	Q8N112	164 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	TEX26	Q8N6G2	289 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	TCEANC	Q8N8B7	351 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	CNBD1	Q8NA66	436 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	TMEM178A	Q8NBL3	297 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	OR5AP2	Q8NGF4	316 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	OR52E1	Q8NGJ3	308 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	ZNRF4	Q8WWF5	429 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	CASP10	Q92851	521 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	SLCO4A1	Q96BD0	722 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	NECTIN4	Q96NY8	510 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	IL12RB2	Q99665	862 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	NTMT1	Q9BV86	223 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	XPO4	Q9C0E2	1151 aa	Known RBP	3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	NYX	Q9GZU5	481 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	CARD9	Q9H257	536 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	MTIF3	Q9H2K0	278 aa	Known RBP	3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	KCNMB3	Q9NPA1	279 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	RNF186	Q9NXI6	227 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	HOOK1	Q9UJC3	728 aa	Known RBP	3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	ERVK-19	Q9WJR5	959 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	PIN4	Q9Y237	131 aa	Known RBP	3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	SH3GLB1	Q9Y371	365 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	SELENOK	Q9Y6D0	94 aa		3.84	□□□□□ -1.8
KTN1-222	ENST00000555506	SCN5A	Q14524	2016 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	NOTCH4	Q99466	2003 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	IGHV4-4	A0A075B6R2	117 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506		A0A087WZ39	114 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	IFITM10	A6NMD0	228 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	FAM72C	H0Y354	149 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	STAM2	O75886	525 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	CHRNG	P07510	517 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	HMBS	P08397	361 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	CCDC192	P0DO97	292 aa		3.83	□□□□□ -1.8
KTN1-222	ENST00000555506	ODC1	P11926	461 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms