RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 RPL14P50914 215 aaKnown RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 PLA2G16P53816 162 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 PCBP4P57723 403 aaKnown RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 RAB8AP61006 207 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 OCRLQ01968 901 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 DEFB134Q4QY38 66 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 ZNF385CQ66K41 422 aaPredicted RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 ABHD17CQ6PCB6 329 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 ZNF517Q6ZMY9 492 aaPredicted RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 ATG14Q6ZNE5 492 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 TIPARPQ7Z3E1 657 aaKnown RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 TRIM46Q7Z4K8 759 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 DTX1Q86Y01 620 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 RNF175Q8N4F7 328 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 ZNF781Q8N8C0 355 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 AGR3Q8TD06 166 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 TWIST2Q8WVJ9 160 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 MR1Q95460 341 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 RGMAQ96B86 450 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 MMABQ96EY8 250 aaPredicted RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 TBCDQ9BTW9 1192 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 FAM117AQ9C073 453 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 AICDAQ9GZX7 198 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 ZNF395Q9H8N7 513 aaPredicted RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 COPS7BQ9H9Q2 264 aaPredicted RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 AHSPQ9NZD4 102 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 VPS29Q9UBQ0 182 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 SLC12A4Q9UP95 1085 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 MRPS2Q9Y399 296 aaKnown RBP13.56□□□□□ -0.24
CHD8-208ENST00000555301 FIS1Q9Y3D6 152 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 NAALAD2Q9Y3Q0 740 aa13.56□□□□□ -0.24
CHD8-208ENST00000555301 C9J4A7 227 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 SLC28A1O00337 649 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 RGS14O43566 566 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 SH3BGRLO75368 114 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 KLHL18O94889 574 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 ETHE1O95571 254 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 CD63P08962 238 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 BTN3A2P78410 334 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 FOXK2Q01167 660 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 DSG2Q14126 1118 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 IMPG1Q17R60 797 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 AP5B1Q2VPB7 878 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 UGT3A2Q3SY77 523 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 NKAIN1Q4KMZ8 207 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 ARHGAP40Q5TG30 622 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 CACNA2D3Q8IZS8 1091 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 ZNF248Q8NDW4 579 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 OR9A4Q8NGU2 314 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 SNIP1Q8TAD8 396 aaKnown RBP13.55□□□□□ -0.24
CHD8-208ENST00000555301 COL26A1Q96A83 441 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 RNF31Q96EP0 1072 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 C7orf26Q96N11 449 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 HBEGFQ99075 208 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 TMEM121BQ9BXQ6 578 aaPredicted RBP13.55□□□□□ -0.24
CHD8-208ENST00000555301 IFT80Q9P2H3 777 aaPredicted RBP13.55□□□□□ -0.24
CHD8-208ENST00000555301 WDFY3Q8IZQ1 3526 aa13.55□□□□□ -0.24
CHD8-208ENST00000555301 TEX51A0A1B0GUA7 166 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 TMEM233B4DJY2 109 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 SLCO1B7G3V0H7 640 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 SGK494L7N484 410 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 SAP18O00422 153 aaKnown RBP13.54□□□□□ -0.24
CHD8-208ENST00000555301 PLPP1O14494 284 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 SCELO95171 688 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 ALBP02768 609 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 FBLP22087 321 aaKnown RBP13.54□□□□□ -0.24
CHD8-208ENST00000555301 STAT5AP42229 794 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 SSR2P43308 183 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 OR1D4P47884 311 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 MTTPP55157 894 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 OR4C11Q6IEV9 310 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 SCIMPQ6UWF3 145 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 PRSS41Q7RTY9 318 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 PAGE2Q7Z2X7 111 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 UBE3DQ7Z6J8 389 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 NUDT13Q86X67 352 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 PDSS2Q86YH6 399 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 CRLF3Q8IUI8 442 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 DDIASQ8IXT1 998 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 METTL27Q8N6F8 245 aaPredicted RBP13.54□□□□□ -0.24
CHD8-208ENST00000555301 IL22RA1Q8N6P7 574 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 NKD1Q969G9 470 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 FKBP10Q96AY3 582 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 METTL2AQ96IZ6 378 aaKnown RBP13.54□□□□□ -0.24
CHD8-208ENST00000555301 SERINC2Q96SA4 455 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 NPLQ9BXD5 320 aaPredicted RBP13.54□□□□□ -0.24
CHD8-208ENST00000555301 ACPTQ9BZG2 426 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 CHST8Q9H2A9 424 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 PRDM7Q9NQW5 492 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 GPN3Q9UHW5 284 aaPredicted RBP13.54□□□□□ -0.24
CHD8-208ENST00000555301 ADAM29Q9UKF5 820 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 MAP4K5Q9Y4K4 846 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 MAU2Q9Y6X3 613 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 PCM1Q15154 2024 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 KNTC1P50748 2209 aa13.54□□□□□ -0.24
CHD8-208ENST00000555301 C21orf140B9A014 251 aa13.53□□□□□ -0.24
CHD8-208ENST00000555301 C4orf51C9J302 202 aa13.53□□□□□ -0.24
CHD8-208ENST00000555301 PIP5K1BO14986 540 aa13.53□□□□□ -0.24
CHD8-208ENST00000555301 B3GALT2O43825 422 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms