RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SLC25A23Q9BV35 468 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 C1QTNF3Q9BXJ4 246 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 NUF2Q9BZD4 464 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 DHRS7Q9Y394 339 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 PTRH2Q9Y3E5 179 aaKnown RBP11.86□□□□□ -0.51
SHMT2-214ENST00000554604 NUP210LQ5VU65 1888 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 FLNCQ14315 2725 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 SETXQ7Z333 2677 aaKnown RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 A0A1B0GX78 115 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 E9PBE3 544 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 UBXN8O00124 270 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 KLHL41O60662 606 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 SUPT7LO94864 414 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 TSPAN12O95859 305 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 FGF4P08620 206 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 MPC1LP0DKB6 136 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 PIM1P11309 404 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 CPOXP36551 454 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 PGM1P36871 562 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 CPA2P48052 419 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 PGDP52209 483 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 PNLIPRP1P54315 467 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 RRADP55042 308 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 VSX2P58304 361 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 KCNC4Q03721 635 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 TLE1Q04724 770 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 KLRB1Q12918 225 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 FASTKQ14296 549 aaKnown RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 PDCD2Q16342 344 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 FAM214AQ32MH5 1076 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 YOD1Q5VVQ6 348 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 SUSD1Q6UWL2 747 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 TMEM102Q8N9M5 508 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 CEP70Q8NHQ1 597 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 GIMAP7Q8NHV1 300 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 ADAMTS17Q8TE56 1095 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 ASB11Q8WXH4 323 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 IP6K3Q96PC2 410 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 DPH7Q9BTV6 452 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 WDR55Q9H6Y2 383 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 MEAF6Q9HAF1 191 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 MRPS30Q9NP92 439 aaKnown RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 UTP6Q9NYH9 597 aaKnown RBP11.85□□□□□ -0.51
SHMT2-214ENST00000554604 RNF112Q9ULX5 631 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 TRAF6Q9Y4K3 522 aa11.85□□□□□ -0.51
SHMT2-214ENST00000554604 UBR5O95071 2799 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 A0A0J9YVX5 310 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 A0A1W2PPV9 198 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 SUPT3HB4E1H0 165 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 K7EM74 188 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 PEX12O00623 359 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 DSCR3O14972 297 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 SRPX2O60687 465 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 CTSVO60911 334 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 PEX11AO75192 247 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 SUPT3HO75486 399 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 KLF7O75840 302 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 CCNDBP1O95273 360 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 WISP1O95388 367 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 ZIC2O95409 532 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 SLC16A8O95907 504 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 EIF2S1P05198 315 aaKnown RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 RPS17P08708 135 aaKnown RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 ERGP11308 486 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 COX4I1P13073 169 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 GFAPP14136 432 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 EZRP15311 586 aaKnown RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 EPHA3P29320 983 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 CASRP41180 1078 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 RGS4P49798 205 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 MXRA7P84157 204 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 BTKQ06187 659 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 ATP1A4Q13733 1029 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 SSPNQ14714 243 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 TSNQ15631 228 aaKnown RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 THEMIS2Q5TEJ8 643 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 CHSY3Q70JA7 882 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 UBE2R2Q712K3 238 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 MED25Q71SY5 747 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 CPNE9Q8IYJ1 553 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 CLYBLQ8N0X4 340 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 OR2Y1Q8NGV0 311 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 AGAP11Q8TF27 550 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 EXT2Q93063 718 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 LINGO1Q96FE5 620 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 PKP4Q99569 1192 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 SHCBP1LQ9BZQ2 653 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 DENND2DQ9H6A0 471 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-214ENST00000554604 CLMPQ9H6B4 373 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 CUTCQ9NTM9 273 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 TAC3Q9UHF0 121 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 IKZF3Q9UKT9 509 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 KLK4Q9Y5K2 254 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 SCN3AQ9NY46 2000 aa11.84□□□□□ -0.51
SHMT2-214ENST00000554604 NPEPPSL1A6NEC2 478 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 A6NL46 340 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 TMEM233B4DJY2 109 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 GFYI3L273 518 aa11.83□□□□□ -0.52
SHMT2-214ENST00000554604 EIF3FO00303 357 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms