RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	HNF1B	P35680	557 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	HMGCL	P35914	325 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC1A6	P48664	564 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SLC37A1	P57057	533 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RPS3A	P61247	264 aa	Known RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	IRX4	P78413	519 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARHGAP8	P85298	464 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SHC2	P98077	582 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	DMC1	Q14565	340 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF77	Q15935	545 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM83E	Q2M2I3	478 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	USP39	Q53GS9	565 aa	Known RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZNF789	Q5FWF6	425 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARMC12	Q5T9G4	340 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LAIR1	Q6GTX8	287 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM45BP	Q6NSW5	357 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	AFTPH	Q6ULP2	937 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZYG11A	Q6WRX3	759 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ZCCHC23	Q6ZST2	131 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TPGS1	Q6ZTW0	290 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	RHOU	Q7L0Q8	258 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	TMEM25	Q86YD3	366 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LAS2	Q8IYD9	372 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	ADGRF3	Q8IZF5	1079 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	GPATCH11	Q8N954	259 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	LPCAT1	Q8NF37	534 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	OR4K2	Q8NGD2	314 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	OR13C4	Q8NGS5	318 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM45A	Q8TCE6	357 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PPP4R1	Q8TF05	950 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	KCTD4	Q8WVF5	259 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	THOC1	Q96FV9	657 aa	Known RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CD180	Q99467	661 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	OLFM1	Q99784	485 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MRPL57	Q9BQC6	102 aa	Known RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	THAP7	Q9BT49	309 aa	Predicted RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FAM96A	Q9H5X1	160 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	POPDC3	Q9HBV1	291 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MAGEE1	Q9HCI5	957 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PPP1R14D	Q9NXH3	145 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	PLK2	Q9NYY3	685 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	INTS6	Q9UL03	887 aa	Known RBP	4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	FZD4	Q9ULV1	537 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	CLEC4E	Q9ULY5	219 aa		4.59	□□□□□ -1.67
PPP4R3A-204	ENST00000554574	NUMA1	Q14980	2115 aa		4.59	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	PIPSL	A2A3N6	862 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	GAGE10	A6NGK3	116 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	OR51F1	A6NGY5	319 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	C17orf100	A8MU93	164 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574		K7ERQ8	282 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TRAFD1	O14545	582 aa	Predicted RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SLC9A3R1	O14745	358 aa	Predicted RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	PFDN6	O15212	129 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SMAD6	O43541	496 aa	Known RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	BUD23	O43709	281 aa	Known RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ZNF821	O75541	412 aa	Predicted RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ATP5H	O75947	161 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CSPG5	O95196	566 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	IGSF6	O95976	241 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	C1S	P09871	688 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	LAMP2	P13473	410 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	MYOG	P15173	224 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ALOX12	P18054	663 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CD9	P21926	228 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NDUFS1	P28331	727 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SLC8A1	P32418	973 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TTPA	P49638	278 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SUOX	P51687	545 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ABCE1	P61221	599 aa	Known RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SNRPD1	P62314	119 aa	Known RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SULT2A1	Q06520	285 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	BCL2L1	Q07817	233 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ASPH	Q12797	758 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	DLG1	Q12959	904 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	GPM6B	Q13491	265 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ALKBH1	Q13686	389 aa	Known RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ITGA9	Q13797	1035 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SEMA3A	Q14563	771 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	PTPRCAP	Q14761	206 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	GXYLT1	Q4G148	440 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	HECTD2	Q5U5R9	776 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	FAM91A1	Q658Y4	838 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	LRRC8E	Q6NSJ5	796 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	MTFR2	Q6P444	385 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	KLC3	Q6P597	504 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ZNF549	Q6P9A3	640 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SFTPA1	Q8IWL2	248 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TTC30B	Q8N4P2	665 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	LSMEM1	Q8N8F7	131 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ENDOV	Q8N8Q3	282 aa	Known RBP	4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ABHD11	Q8NFV4	315 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	OR2AP1	Q8NGE2	309 aa		4.58	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	MAFA	Q8NHW3	353 aa	Predicted RBP	4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms