RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 WASH6PQ9NQA3 447 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 TMEM216Q9P0N5 145 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SLC17A7Q9P2U7 560 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 SPASTQ9UBP0 616 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 DCDC2Q9UHG0 476 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 PSMD13Q9UNM6 376 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 PLLPQ9Y342 182 aa6.09□□□□□ -1.43
SCFD1-212ENST00000554486 ZFHX2Q9C0A1 2572 aaPredicted RBP6.09□□□□□ -1.44
SCFD1-212ENST00000554486 SNRNP200O75643 2136 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 FAM186AA6NE01 2351 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 USP34Q70CQ2 3546 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 TMEM120BA0PK00 339 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 KRT87PA6NCN2 255 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 OR52A4PA6NMU1 304 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 PDZK1P1A8MUH7 402 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 B5MCH6 92 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 DFNA5O60443 496 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 PLIN3O60664 434 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 PSIP1O75475 530 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 UBXN7O94888 489 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 C1orf105O95561 183 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 C8GP07360 202 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 SLC35G4P0C7Q5 338 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 MTHFD1P11586 935 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 ENGP17813 658 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 TNFRSF1AP19438 455 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 MALP21145 153 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 EPHA8P29322 1005 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 RPA3P35244 121 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 BDKRB1P46663 353 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 CCT5P48643 541 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 UBE2IP63279 158 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 NKX6-1P78426 367 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 IL9RQ01113 521 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 RAB39AQ14964 217 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 ELOCQ15369 112 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 SF3A2Q15428 464 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 RPE65Q16518 533 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 PHKG1Q16816 387 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 PPP1R3AQ16821 1122 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 DEFB133Q30KQ1 61 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 GFOD2Q3B7J2 385 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 CCSMST1Q4G0I0 132 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 KLC3Q6P597 504 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 IYDQ6PHW0 289 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 IL27RAQ6UWB1 636 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 LCA5Q86VQ0 697 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 GKN2Q86XP6 184 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 GPSM1Q86YR5 675 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 SDR16C5Q8N3Y7 309 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 FAM46DQ8NEK8 389 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 OR5AR1Q8NGP9 310 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 CFAP61Q8NHU2 1237 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 TCP10LQ8TDR4 215 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 DENND1AQ8TEH3 1009 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 SKA2Q8WVK7 121 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 PATE1Q8WXA2 126 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 TFGQ92734 400 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 RGMAQ96B86 450 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 C12orf66Q96MD2 445 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 MRPL57Q9BQC6 102 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 CPPED1Q9BRF8 314 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 NDC1Q9BTX1 674 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 NUSAP1Q9BXS6 441 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 TFB2MQ9H5Q4 396 aaKnown RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 GAREM1Q9H706 876 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 KCNK9Q9NPC2 374 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 FBXO34Q9NWN3 711 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 FAM30AQ9NZY2 134 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 ZNF624Q9P2J8 865 aaPredicted RBP6.08□□□□□ -1.44
SCFD1-212ENST00000554486 XPR1Q9UBH6 696 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 GRID1Q9ULK0 1009 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 PDE10AQ9Y233 779 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 CSNK1G3Q9Y6M4 447 aa6.08□□□□□ -1.44
SCFD1-212ENST00000554486 UNC13CQ8NB66 2214 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 PCNX2A6NKB5 2137 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 HEATR5BQ9P2D3 2071 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 LNP1A1A4G5 178 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 CCDC189A1A4V9 331 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 NEMP2A6NFY4 417 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 PRSS29PA6NIE9 313 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 B4DGG1 531 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 G3V2L1 256 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 UBXN8O00124 270 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 IFRD1O00458 451 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-212ENST00000554486 TRIM38O00635 465 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 TM9SF1O15321 606 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 SLC16A5O15375 505 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 SLC16A6O15403 523 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 YKT6O15498 198 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 FFAR2O15552 330 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 B3GALT2O43825 422 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 KERAO60938 352 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 TUSC2O75896 110 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 CER1O95813 267 aa6.07□□□□□ -1.44
SCFD1-212ENST00000554486 LMNAP02545 664 aaKnown RBP6.07□□□□□ -1.44
SCFD1-212ENST00000554486 CATP04040 527 aaKnown RBP6.07□□□□□ -1.44
SCFD1-212ENST00000554486 ANXA6P08133 673 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms