RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CFAP73A6NFT4 308 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SYCE1LA8MT33 242 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MYO1GB0I1T2 1018 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 HHLA1C9JL84 531 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 FAM47E-STBD1D6RA91 191 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ABCD4O14678 606 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 BIRC5O15392 142 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PHGDHO43175 533 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ZSCAN12O43309 604 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 CUTAO60888 179 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 JRKO75564 520 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 IPO13O94829 963 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SERPING1P05155 500 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 UGT2B4P06133 528 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 STSP08842 583 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SBK2P0C263 348 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 FTH1P19P0C7X4 201 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 RPA2P15927 270 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ERCC2P18074 760 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PCMT1P22061 227 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 CD6P30203 668 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ALDH3B1P43353 468 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SLC11A2P49281 568 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SUCLG1P53597 346 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 GNGT1P63211 74 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SPIBQ01892 262 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 BNC1Q01954 994 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 INCA1Q0VD86 236 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SCAPQ12770 1279 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM115Q12893 351 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PCLAFQ15004 111 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PDK2Q15119 407 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TRIP6Q15654 476 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 BAK1Q16611 211 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PCID2Q5JVF3 399 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 DCST1Q5T197 706 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SFRP5Q5T4F7 317 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 C1orf146Q5VVC0 180 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 LIPNQ5VXI9 398 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 OGFOD2Q6N063 350 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 KLHL35Q6PF15 583 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 USP30Q70CQ3 517 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 S100A7AQ86SG5 101 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ZSWIM9Q86XI8 627 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TICAM1Q8IUC6 712 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM139Q8IV31 216 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ALLCQ8N6M5 410 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ARL14EPQ8N8R7 260 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 UXS1Q8NBZ7 420 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 DTX3LQ8TDB6 740 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 WDR60Q8WVS4 1066 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PHYHIPQ92561 330 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SPSB4Q96A44 273 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 RGMAQ96B86 450 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PHF21AQ96BD5 680 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 RASD2Q96D21 266 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MARS2Q96GW9 593 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ANKRD36BP1Q96IX9 119 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 SLC6A18Q96N87 628 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF317Q96PQ6 595 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ASCL2Q99929 193 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 NRSN2Q9GZP1 204 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 POLR1EQ9GZS1 481 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 LACRTQ9GZZ8 138 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MKRN2Q9H000 416 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 KLHL25Q9H0H3 589 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 RAB17Q9H0T7 212 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 XYLT2Q9H1B5 865 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 LHX5Q9H2C1 402 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 LRMDAQ9H2I8 198 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 LINC00597Q9H2U6 94 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 PPANQ9NQ55 473 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 DIABLOQ9NR28 239 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 FAM207AQ9NSI2 230 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 MS4A12Q9NXJ0 267 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 HPSEQ9Y251 543 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ERGIC3Q9Y282 383 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 HYOU1Q9Y4L1 999 aa2.61□□□□□ -1.99
PRPF39-206ENST00000554429 ASCC3Q8N3C0 2202 aaKnown RBP2.61□□□□□ -1.99
PRPF39-206ENST00000554429 DMDP11532 3685 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CHD6Q8TD26 2715 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MYO15AQ9UKN7 3530 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NPHP3-ACAD11A0A0J9YXS1 232 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TCRBV21S2A2A0A5A6 115 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TRBC2A0A5B9 178 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 WASHC1A8K0Z3 465 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 A8MXQ7 604 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 WASH3PC4AMC7 463 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ATP6V1G2-DDX39BF2Z307 99 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 K7EQM0 130 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ERVH48-1M5A8F1 160 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SLC33A1O00400 549 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CES2O00748 559 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 HS3ST1O14792 307 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TNFSF14O43557 240 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CCNT2O60583 730 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NSA2O95478 260 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TOP3BO95985 862 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CSF2P04141 144 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 GYPCP04921 128 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms