RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 GGT5P36269 586 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 BCL6P41182 706 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 SLC6A12P48065 614 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 POLE2P56282 527 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 REEP5Q00765 189 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 MEF2AQ02078 507 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 TGM3Q08188 693 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 IFFO1Q0D2I5 559 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 KCNAB2Q13303 367 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 OR4D1Q15615 310 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 FXNQ16595 210 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 PFKFB4Q16877 469 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 FAM153CQ494X1 144 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 MFSD4BQ5TF39 518 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF385CQ66K41 422 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 ATG9BQ674R7 924 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 LCN10Q6JVE6 187 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 TMIGD1Q6UXZ0 262 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 MED25Q71SY5 747 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 ISCA2Q86U28 154 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 LCA5Q86VQ0 697 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 MYLK4Q86YV6 388 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 GSPT2Q8IYD1 628 aaKnown RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 KLHDC8AQ8IYD2 350 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 CLEC1AQ8NC01 280 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 OR4K1Q8NGD4 311 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 ZCCHC10Q8TBK6 192 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 DCAKDQ8WVC6 231 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 METTL21AQ8WXB1 218 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 ATP6V1E2Q96A05 226 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 PTCD3Q96EY7 689 aaKnown RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 OR4K3Q96R72 315 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 RUFY1Q96T51 708 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 CENPKQ9BS16 269 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 CRB3Q9BUF7 120 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 SLC26A1Q9H2B4 701 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 EHD1Q9H4M9 534 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 SEMA3GQ9NS98 782 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 GEMIN8Q9NWZ8 242 aaKnown RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 FETUBQ9UGM5 382 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 TUBD1Q9UJT1 453 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 PTBP2Q9UKA9 531 aaKnown RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 SDK2Q58EX2 2172 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 AHCTF1Q8WYP5 2266 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 PSMD12O00232 456 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 MAP2K7O14733 419 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 PCDH17O14917 1159 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 PDPK1O15530 556 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 LCMT2O60294 686 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 NSA2O95478 260 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ONECUT2O95948 504 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 STATHP02808 62 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ALOX12P18054 663 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 IL10P22301 178 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 SERPINB1P30740 379 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 GDF5P43026 501 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 CCL11P51671 97 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 EMP2P54851 167 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ALDH18A1P54886 795 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 IRF9Q00978 393 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 C19orf57Q0VDD7 668 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 DLG1Q12959 904 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 CHIT1Q13231 466 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 LY6DQ14210 128 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 RCN2Q14257 317 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 SLBPQ14493 270 aaKnown RBP eCLIP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 NKG7Q16617 165 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ATP1A1-AS1Q5TC04 95 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 METTL2BQ6P1Q9 378 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 PRSS58Q8IYP2 241 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 CENPLQ8N0S6 344 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 TEX9Q8N6V9 391 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 LRRN4CLQ8ND94 238 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 SRFBP1Q8NEF9 429 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 C9orf43Q8TAL5 461 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 STT3BQ8TCJ2 826 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ACMSDQ8TDX5 336 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 PPP4R1Q8TF05 950 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ESAMQ96AP7 390 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 REPS1Q96D71 796 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ATOH8Q96SQ7 321 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 MRPL57Q9BQC6 102 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 TMEM79Q9BSE2 394 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 SARGQ9BW04 601 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ROGDIQ9GZN7 287 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ING2Q9H160 280 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 MRPL46Q9H2W6 279 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 NT5DC2Q9H857 520 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 COPS7BQ9H9Q2 264 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 CLK4Q9HAZ1 481 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 C19orf25Q9UFG5 118 aaPredicted RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 TBK1Q9UHD2 729 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 ADGRE2Q9UHX3 823 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 RALYQ9UKM9 306 aaKnown RBP7.91□□□□□ -1.14
PSEN1-209ENST00000553855 SLC22A7Q9Y694 548 aa7.91□□□□□ -1.14
PSEN1-209ENST00000553855 FREM2Q5SZK8 3169 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SMIM23A6NLE4 172 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 TAPBPO15533 448 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 P2RX6O15547 441 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms