RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CEACAM8P31997 349 aaPredicted RBP8.41□□□□□ -1.06
PRKCH-208ENST00000553846 CYLC1P35663 651 aaPredicted RBP8.41□□□□□ -1.06
PRKCH-208ENST00000553846 MAGEA5P43359 124 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 KLHL38Q2WGJ6 581 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 XKR6Q5GH73 641 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 ADGRD1Q6QNK2 874 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 C16orf47Q6ZP98 133 aaPredicted RBP8.41□□□□□ -1.06
PRKCH-208ENST00000553846 LINC00523Q86TU6 105 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 CTAGE6Q86UF2 777 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 LUZP1Q86V48 1076 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 SLC26A11Q86WA9 606 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 REXO1L1PQ8IX06 675 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 LRRC75A-AS1Q8N1F1 130 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 FAM109AQ8N4B1 249 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 SIMC1Q8NDZ2 872 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 B3GNT7Q8NFL0 401 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 ASB11Q8WXH4 323 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 LRRC45Q96CN5 670 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 FOPNLQ96NB1 174 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 AARSD1Q9BTE6 412 aaKnown RBP8.41□□□□□ -1.06
PRKCH-208ENST00000553846 DEFB126Q9BYW3 111 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 ZNF395Q9H8N7 513 aaPredicted RBP8.41□□□□□ -1.06
PRKCH-208ENST00000553846 NECTIN3Q9NQS3 549 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 FAM114A2Q9NRY5 505 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 ABHD10Q9NUJ1 306 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 TMEM184CQ9NVA4 438 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 KCMF1Q9P0J7 381 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 TRPS1Q9UHF7 1281 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 TFR2Q9UP52 801 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 PCDHGB3Q9Y5G1 929 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.41□□□□□ -1.06
PRKCH-208ENST00000553846 DOCK7Q96N67 2140 aa8.41□□□□□ -1.06
PRKCH-208ENST00000553846 CLCA1A8K7I4 914 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 ERI2A8K979 691 aaKnown RBP8.4□□□□□ -1.06
PRKCH-208ENST00000553846 PSMD3O43242 534 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 CHST10O43529 356 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 ZNF354AO60765 605 aaPredicted RBP8.4□□□□□ -1.06
PRKCH-208ENST00000553846 OR6B1O95007 311 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 JAK1P23458 1154 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 HRH2P25021 359 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 PPARGP37231 505 aaPredicted RBP8.4□□□□□ -1.06
PRKCH-208ENST00000553846 CLCN7P51798 805 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 EIF3BP55884 814 aaKnown RBP8.4□□□□□ -1.06
PRKCH-208ENST00000553846 TBPL1P62380 186 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 OLR1P78380 273 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 PRAMEP78395 509 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 SORDQ00796 357 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 MEF2AQ02078 507 aaPredicted RBP8.4□□□□□ -1.06
PRKCH-208ENST00000553846 NDUFAF5Q5TEU4 345 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 PAOXQ6QHF9 649 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 PRSS57Q6UWY2 283 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 CYHR1Q6ZMK1 362 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 ADCK2Q7Z695 626 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 ASPGQ86U10 573 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 SLC22A16Q86VW1 577 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 SLC13A5Q86YT5 568 aaPredicted RBP8.4□□□□□ -1.06
PRKCH-208ENST00000553846 SCUBE1Q8IWY4 988 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 GPALPP1Q8IXQ4 340 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 ULK2Q8IYT8 1036 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 CAMKVQ8NCB2 501 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 GSDMBQ8TAX9 411 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 MCOLN3Q8TDD5 553 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 FAM136AQ96C01 138 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 PIP5K1AQ99755 562 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 FAM129AQ9BZQ8 928 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 AICDAQ9GZX7 198 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 ATG10Q9H0Y0 220 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 SH2D2AQ9NP31 389 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 SEMA4BQ9NPR2 832 aaPredicted RBP8.4□□□□□ -1.06
PRKCH-208ENST00000553846 CHRAC1Q9NRG0 131 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 JKAMPQ9P055 326 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 IFNKQ9P0W0 207 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 GTF3C3Q9Y5Q9 886 aa8.4□□□□□ -1.06
PRKCH-208ENST00000553846 ROS1P08922 2347 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 MEGF8Q7Z7M0 2845 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 TCRBV7S2A1N4TA0A589 114 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 TRIM64A6NGJ6 449 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 TRIM64BA6NI03 449 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF839A8K0R7 811 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 FAM47E-STBD1D6RA91 191 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ACOT7O00154 380 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 SLC16A5O15375 505 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 B4GALT2O60909 372 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 MFAP3LO75121 409 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 CRLF1O75462 422 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 OR2J2O76002 312 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ESR1P03372 595 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 CATP04040 527 aaKnown RBP8.39□□□□□ -1.07
PRKCH-208ENST00000553846 C8BP07358 591 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 PPP2R1BP30154 601 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 SOX3P41225 446 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 SSR4P51571 173 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 CLCN2P51788 898 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 ZNF136P52737 540 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 HYAL2Q12891 473 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 TSTA3Q13630 321 aaPredicted RBP8.39□□□□□ -1.07
PRKCH-208ENST00000553846 HERC3Q15034 1050 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 DEFB134Q4QY38 66 aa8.39□□□□□ -1.07
PRKCH-208ENST00000553846 CCDC181Q5TID7 509 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms