RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 PRDM7Q9NQW5 492 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
APEX1-205ENST00000553555 MN1Q10571 1320 aaPredicted RBP13.09□□□□□ -0.31
APEX1-205ENST00000553555 WDR87Q6ZQQ6 2873 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 C4orf51C9J302 202 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 P2RX6O15547 441 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 HCRTR1O43613 425 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 LRATO95237 230 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 IL6P05231 212 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 SMIM10L1P0DMW3 83 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 PRPS1L1P21108 318 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 CSF2RBP32927 897 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 DUSP3P51452 185 aaPredicted RBP13.09□□□□□ -0.31
APEX1-205ENST00000553555 DGKQP52824 942 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 SLC25A3Q00325 362 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 TLR1Q15399 786 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 HKDC1Q2TB90 917 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 COQ5Q5HYK3 327 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 MANEAQ5SRI9 462 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 RETREG3Q86VR2 466 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 NUDT13Q86X67 352 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 MCATQ8IVS2 390 aaKnown RBP13.09□□□□□ -0.31
APEX1-205ENST00000553555 KIF2BQ8N4N8 673 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 AMER3Q8N944 861 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 GFM2Q969S9 779 aaKnown RBP13.09□□□□□ -0.31
APEX1-205ENST00000553555 VPS33AQ96AX1 596 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 TESCQ96BS2 214 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 SMIM10Q96HG1 83 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 KCNC2Q96PR1 638 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 TEFMQ96QE5 360 aaKnown RBP13.09□□□□□ -0.31
APEX1-205ENST00000553555 C17orf62Q9BQA9 187 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 TBCDQ9BTW9 1192 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 MYNNQ9NPC7 610 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 MAP10Q9P2G4 905 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 KLHL3Q9UH77 587 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 MAPRE3Q9UPY8 281 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 MYO15AQ9UKN7 3530 aa13.09□□□□□ -0.31
APEX1-205ENST00000553555 COL5A1P20908 1838 aaPredicted RBP13.08□□□□□ -0.31
APEX1-205ENST00000553555 A0A0G2JN53 185 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 ASPDHA6ND91 283 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 URADA6NGE7 173 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 MRASO14807 208 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 ANGPT2O15123 496 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 CASC3O15234 703 aaKnown RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 GSC2O15499 205 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 CFLARO15519 480 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 ERI3O43414 337 aaKnown RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 AKAP10O43572 662 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 ZBTB11O95625 1053 aaPredicted RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 KRT16P08779 473 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 ITGAXP20702 1163 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 SSR2P43308 183 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 TSFMP43897 325 aaKnown RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 GABRA4P48169 554 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 NUDT2P50583 147 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 VSX2P58304 361 aaPredicted RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 TAS2R50P59544 299 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 CCL7P80098 99 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 DAB2P98082 770 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 TGM3Q08188 693 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 ART3Q13508 389 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 FAM174BQ3ZCQ3 159 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 TIGD2Q4W5G0 525 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 SPANXN4Q5MJ08 99 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 FAM71E1Q6IPT2 247 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 ZNF793Q6ZN11 406 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 ZNF655Q8N720 491 aaPredicted RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 CDC26Q8NHZ8 85 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 UTP15Q8TED0 518 aaKnown RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 GAL3ST3Q96A11 431 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 TM4SF18Q96CE8 201 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 CCDC3Q9BQI4 270 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 CADM1Q9BY67 442 aaKnown RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 KCNH6Q9H252 994 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 PDE7BQ9NP56 450 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 TMEM9Q9P0T7 183 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 LEF1Q9UJU2 399 aaPredicted RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 EXO1Q9UQ84 846 aaKnown RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 WBP11Q9Y2W2 641 aaKnown RBP13.08□□□□□ -0.32
APEX1-205ENST00000553555 FRYLO94915 3013 aa13.08□□□□□ -0.32
APEX1-205ENST00000553555 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 ARHGAP10A1A4S6 786 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 ZSCAN9O15535 394 aaPredicted RBP13.07□□□□□ -0.32
APEX1-205ENST00000553555 SRPX2O60687 465 aaPredicted RBP13.07□□□□□ -0.32
APEX1-205ENST00000553555 RASSF9O75901 435 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 EIF2S1P05198 315 aaKnown RBP13.07□□□□□ -0.32
APEX1-205ENST00000553555 PGRP06401 933 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 ATP5A1P25705 553 aaKnown RBP13.07□□□□□ -0.32
APEX1-205ENST00000553555 GRK6P43250 576 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 RAB8AP61006 207 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 TRA2BP62995 288 aaKnown RBP13.07□□□□□ -0.32
APEX1-205ENST00000553555 PHC1P78364 1004 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 SRSF11Q05519 484 aaKnown RBP13.07□□□□□ -0.32
APEX1-205ENST00000553555 C2orf80Q0P641 193 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 SF3A2Q15428 464 aaKnown RBP13.07□□□□□ -0.32
APEX1-205ENST00000553555 UGT8Q16880 541 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 DPY19L1Q2PZI1 675 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 PAGE3Q5JUK9 113 aa13.07□□□□□ -0.32
APEX1-205ENST00000553555 TMEM71Q6P5X7 295 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms