RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 OVOL2Q9BRP0 275 aa5.35□□□□□ -1.55
PCNX1-205ENST00000553508 PI4K2AQ9BTU6 479 aa5.35□□□□□ -1.55
PCNX1-205ENST00000553508 CCDC177Q9NQR7 707 aaPredicted RBP5.35□□□□□ -1.55
PCNX1-205ENST00000553508 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.35□□□□□ -1.55
PCNX1-205ENST00000553508 ELF5Q9UKW6 265 aaPredicted RBP5.35□□□□□ -1.55
PCNX1-205ENST00000553508 LMO7Q8WWI1 1683 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 USP6P35125 1406 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 CEACAM4O75871 244 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 GGPS1O95749 300 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 HPRP00739 348 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 STAG3L1P0CL83 205 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 MYL6BP14649 208 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 SFTPDP35247 375 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 HSD17B3P37058 310 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 NOVP48745 357 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 DLK1P80370 383 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 CD300CQ08708 224 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 PTGISQ16647 500 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 KRT80Q6KB66 452 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 C16orf54Q6UWD8 224 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 MAML2Q8IZL2 1156 aaPredicted RBP5.34□□□□□ -1.55
PCNX1-205ENST00000553508 FOXN4Q96NZ1 517 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 GTPBP2Q9BX10 602 aaKnown RBP5.34□□□□□ -1.55
PCNX1-205ENST00000553508 SDCBP2Q9H190 292 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 SNX25Q9H3E2 840 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 RIMS4Q9H426 269 aaPredicted RBP5.34□□□□□ -1.55
PCNX1-205ENST00000553508 MTHFD2LQ9H903 347 aaPredicted RBP5.34□□□□□ -1.55
PCNX1-205ENST00000553508 SLC7A10Q9NS82 523 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 HACD3Q9P035 362 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 AGRNO00468 2067 aa5.34□□□□□ -1.55
PCNX1-205ENST00000553508 RGPD3A6NKT7 1758 aaPredicted RBP5.34□□□□□ -1.56
PCNX1-205ENST00000553508 RGPD4Q7Z3J3 1758 aa5.34□□□□□ -1.56
PCNX1-205ENST00000553508 PARP4Q9UKK3 1724 aaKnown RBP5.34□□□□□ -1.56
PCNX1-205ENST00000553508 CAMTA1Q9Y6Y1 1673 aa5.34□□□□□ -1.56
PCNX1-205ENST00000553508 NINLQ9Y2I6 1382 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 A0A1W2PPR1 153 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 POP4O95707 220 aaKnown RBP5.33□□□□□ -1.56
PCNX1-205ENST00000553508 AADACP22760 399 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 HSPA4P34932 840 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 CAPGP40121 348 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 TOM1L2Q6ZVM7 507 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 ZFAND4Q86XD8 727 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 OR4C15Q8NGM1 316 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 PDLIM5Q96HC4 596 aaKnown RBP5.33□□□□□ -1.56
PCNX1-205ENST00000553508 CFAP57Q96MR6 1250 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 LRRC3BQ96PB8 259 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 NEDD4LQ96PU5 975 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 LGMNQ99538 433 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 ANKRD2Q9GZV1 360 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 ACTL8Q9H568 366 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 RNF121Q9H920 327 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 GPN1Q9HCN4 374 aaPredicted RBP5.33□□□□□ -1.56
PCNX1-205ENST00000553508 TBC1D13Q9NVG8 400 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 ZNF510Q9Y2H8 683 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 RREB1Q92766 1687 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 ABCA7Q8IZY2 2146 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 TRPM1Q7Z4N2 1603 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 SLIT3O75094 1523 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 ABCC6O95255 1503 aa5.33□□□□□ -1.56
PCNX1-205ENST00000553508 CPSF1Q10570 1443 aaKnown RBP5.32□□□□□ -1.56
PCNX1-205ENST00000553508 ROCK2O75116 1388 aaKnown RBP5.32□□□□□ -1.56
PCNX1-205ENST00000553508 CCDC7Q96M83 1385 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 NUP188Q5SRE5 1749 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 TTC21AQ8NDW8 1320 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.32□□□□□ -1.56
PCNX1-205ENST00000553508 GLTPD2A6NH11 291 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 G3V2L1 256 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 SLC1A7O00341 560 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 SURF4O15260 269 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 EIF5BO60841 1220 aaKnown RBP5.32□□□□□ -1.56
PCNX1-205ENST00000553508 LDHCP07864 332 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 F3P13726 295 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 HOXC13P31276 330 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 PGFP49763 221 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 MZT1Q08AG7 82 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 ZNF177Q13360 481 aaPredicted RBP5.32□□□□□ -1.56
PCNX1-205ENST00000553508 ALDH1L2Q3SY69 923 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 PIGWQ7Z7B1 504 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 ABHD12Q8N2K0 398 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 CCDC63Q8NA47 563 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 CAMKVQ8NCB2 501 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 EXT2Q93063 718 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 PYCR2Q96C36 320 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 ZNF577Q9BSK1 485 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 RAVER2Q9HCJ3 691 aaKnown RBP5.32□□□□□ -1.56
PCNX1-205ENST00000553508 POLLQ9UGP5 575 aa5.32□□□□□ -1.56
PCNX1-205ENST00000553508 LRRC37A3O60309 1634 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 MTMR11A4FU01 709 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 RTCAO00442 366 aaKnown RBP5.31□□□□□ -1.56
PCNX1-205ENST00000553508 UBE2CO00762 179 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 SRSF10O75494 262 aaKnown RBP5.31□□□□□ -1.56
PCNX1-205ENST00000553508 AOC1P19801 751 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 CLCN4P51793 760 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 MTCP1P56278 107 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 CAMK2DQ13557 499 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 RASA2Q15283 850 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 KYNUQ16719 465 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 FGD3Q5JSP0 725 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 ERC1Q8IUD2 1116 aa5.31□□□□□ -1.56
PCNX1-205ENST00000553508 C17orf47Q8NEP4 570 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms