RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 REXO4Q9GZR2 422 aaKnown RBP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 EPN3Q9H201 632 aa14.48□□□□□ -0.09
SHMT2-204ENST00000553324 ZNF490Q9ULM2 529 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-204ENST00000553324 IQANK1A0A1B0GTG1 560 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 TTLL8A6PVC2 850 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 UGDHO60701 494 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 JRKO75564 520 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 WISP1O95388 367 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 SNRPNP63162 240 aaKnown RBP14.47□□□□□ -0.09
SHMT2-204ENST00000553324 BTN3A2P78410 334 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 KCNC4Q03721 635 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 NSDHLQ15738 373 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 TOR1AIP1Q5JTV8 583 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 LIPJQ5W064 366 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 FAAH2Q6GMR7 532 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 MED27Q6P2C8 311 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 TRIM40Q6P9F5 258 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 CPEB2Q7Z5Q1 589 aaKnown RBP14.47□□□□□ -0.09
SHMT2-204ENST00000553324 TEX9Q8N6V9 391 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 OR2L5Q8NG80 312 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 PNPLA2Q96AD5 504 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 MS4A6EQ96DS6 147 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 SCYL1Q96KG9 808 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 MRPL57Q9BQC6 102 aaKnown RBP14.47□□□□□ -0.09
SHMT2-204ENST00000553324 TXLNGYQ9BZA5 131 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 ROGDIQ9GZN7 287 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 KLHL31Q9H511 634 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 EPS8L2Q9H6S3 715 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 PRM3Q9NNZ6 103 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 SLAMF7Q9NQ25 335 aa14.47□□□□□ -0.09
SHMT2-204ENST00000553324 ZNF860A6NHJ4 632 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 MAGEB17A8MXT2 336 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 ERI3O43414 337 aaKnown RBP14.46□□□□□ -0.09
SHMT2-204ENST00000553324 PRAMEF4O60810 478 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 SMIM24O75264 130 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 FAM153BP0C7A2 387 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 PRR35P0CG20 571 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 RNH1P13489 461 aaKnown RBP14.46□□□□□ -0.09
SHMT2-204ENST00000553324 EPORP19235 508 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 TNFRSF8P28908 595 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 EEF1A2Q05639 463 aaKnown RBP14.46□□□□□ -0.09
SHMT2-204ENST00000553324 ACTN3Q08043 901 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-204ENST00000553324 RCN2Q14257 317 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 ADPRMQ3LIE5 342 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 FAM153CQ494X1 144 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 NADK2Q4G0N4 442 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 TMEM35AQ53FP2 167 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 TECRLQ5HYJ1 363 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 CRB2Q5IJ48 1285 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 TEX35Q5T0J7 233 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 PRAMEF9Q5VWM5 478 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 IGFL2Q6UWQ7 119 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 ISLR2Q6UXK2 745 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 CHSY3Q70JA7 882 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 LAS2Q8IYD9 372 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 PLD6Q8N2A8 252 aaKnown RBP14.46□□□□□ -0.09
SHMT2-204ENST00000553324 RBMXL3Q8N7X1 1067 aaKnown RBP14.46□□□□□ -0.09
SHMT2-204ENST00000553324 ARMC2Q8NEN0 867 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 OR5T3Q8NGG3 340 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 ADAMTS18Q8TE60 1221 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 REPS1Q96D71 796 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 IMMP1LQ96LU5 166 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 PPCSQ9HAB8 311 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 CPSF2Q9P2I0 782 aaKnown RBP14.46□□□□□ -0.09
SHMT2-204ENST00000553324 B3GNT3Q9Y2A9 372 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 PCDHGA11Q9Y5H2 935 aa14.46□□□□□ -0.09
SHMT2-204ENST00000553324 MED13Q9UHV7 2174 aa14.46□□□□□ -0.1
SHMT2-204ENST00000553324 SYNDIG1LA6NDD5 238 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 STX16-NPEPL1H3BU86 382 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 MASP2O00187 686 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 STX16O14662 325 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 B3GALT2O43825 422 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 PRMT3O60678 531 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 CD22P20273 847 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 RHAGQ02094 409 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 Q0VFX4 171 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 GTF2H2Q13888 395 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 ABRAXAS2Q15018 415 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 PCOLCEQ15113 449 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 EXT1Q16394 746 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 GRHL2Q6ISB3 625 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 GTF2H2CQ6P1K8 395 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 QSOX2Q6ZRP7 698 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 ANKRD37Q7Z713 158 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 C7orf57Q8NEG2 295 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 ACMSDQ8TDX5 336 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 KCNC2Q96PR1 638 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 SERINC2Q96SA4 455 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 LPAR4Q99677 370 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 CENPKQ9BS16 269 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 MRPL46Q9H2W6 279 aaKnown RBP14.45□□□□□ -0.1
SHMT2-204ENST00000553324 ACTR8Q9H981 624 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 LANCL2Q9NS86 450 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 CCDC88CQ9P219 2028 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 PSMC3IPQ9P2W1 217 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-204ENST00000553324 TEKT2Q9UIF3 430 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 TSC22D4Q9Y3Q8 395 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 ASB1Q9Y576 335 aa14.45□□□□□ -0.1
SHMT2-204ENST00000553324 CLDN4O14493 209 aa14.44□□□□□ -0.1
SHMT2-204ENST00000553324 CDC123O75794 336 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms