RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 NINJ1Q92982 152 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 ZNF669Q96BR6 464 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-209ENST00000553308 DESI2Q9BSY9 194 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 SGPP1Q9BX95 441 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 FAM129AQ9BZQ8 928 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 PCBD2Q9H0N5 130 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 CCDC68Q9H2F9 335 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 SPNS1Q9H2V7 528 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 DLL4Q9NR61 685 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 PNPLA3Q9NST1 481 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 ZNF358Q9NW07 568 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 KCMF1Q9P0J7 381 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 ST6GALNAC2Q9UJ37 374 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 ZNF223Q9UK11 482 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-209ENST00000553308 FBXW2Q9UKT8 454 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 PDE10AQ9Y233 779 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 DHRS7Q9Y394 339 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 L3MBTL1Q9Y468 752 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 PHF3Q92576 2039 aaKnown RBP8.47□□□□□ -1.05
SYNE2-209ENST00000553308 NAV3Q8IVL0 2385 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 A0A0G2JMM0 328 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 A0A1B0GTL3 188 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 A0A1W2PPB8 328 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 A0A1W2PRS3 328 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 CTAGE15A4D2H0 777 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 TMEM200CA6NKL6 621 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 KIR3DP1A8MWS1 328 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 SLC16A5O15375 505 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 OR1F1O43749 312 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 PRKNO60260 465 aaPredicted RBP8.46□□□□□ -1.06
SYNE2-209ENST00000553308 CTAG2O75638 210 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 TUBB4AP04350 444 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 NPPBP16860 134 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 TPSB2P20231 275 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 SLC1A2P43004 574 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 CLCN2P51788 898 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 KIF5AQ12840 1032 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 DHX34Q14147 1143 aaKnown RBP8.46□□□□□ -1.06
SYNE2-209ENST00000553308 TPSAB1Q15661 275 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 PHKG1Q16816 387 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 GXYLT1Q4G148 440 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 CASC4Q6P4E1 433 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 C16orf47Q6ZP98 133 aaPredicted RBP8.46□□□□□ -1.06
SYNE2-209ENST00000553308 ACAD11Q709F0 780 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 CTAGE6Q86UF2 777 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 LIX1LQ8IVB5 337 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 PSD4Q8NDX1 1056 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 B3GNT7Q8NFL0 401 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 ABHD11Q8NFV4 315 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 OR10Q1Q8NGQ4 319 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 UTP15Q8TED0 518 aaKnown RBP8.46□□□□□ -1.06
SYNE2-209ENST00000553308 PYCR2Q96C36 320 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 PWWP2AQ96N64 755 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 GPATCH1Q9BRR8 931 aaKnown RBP8.46□□□□□ -1.06
SYNE2-209ENST00000553308 POLDIP3Q9BY77 421 aaKnown RBP8.46□□□□□ -1.06
SYNE2-209ENST00000553308 SLC6A16Q9GZN6 736 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 RHBGQ9H310 441 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 LIN28AQ9H9Z2 209 aaKnown RBP8.46□□□□□ -1.06
SYNE2-209ENST00000553308 TIMMDC1Q9NPL8 285 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 PRDM9Q9NQV7 894 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 PLEKHA6Q9Y2H5 1048 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 FAM215AQ9Y5M1 114 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 LIPGQ9Y5X9 500 aa8.46□□□□□ -1.06
SYNE2-209ENST00000553308 A0A0G2JNJ9 132 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ZCWPW2A0A1B0GU75 182 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 TRBC2A0A5B9 178 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 C4orf51C9J302 202 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 G3V3Y1 287 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 FAM155BO75949 473 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 MYO1DO94832 1006 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 GLI4P10075 376 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 RNH1P13489 461 aaKnown RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 CCND1P24385 295 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ACVR2AP27037 513 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 PPP2R1BP30154 601 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 HNF4AP41235 474 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ZFP36L2P47974 494 aaKnown RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 KCNJ1P48048 391 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 VPS41P49754 854 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 SSR4P51571 173 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 CCR8P51685 355 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 RAB8AP61006 207 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 PPIAP62937 165 aaKnown RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 SKP1P63208 163 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 CDK16Q00536 496 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 PLGLB1Q02325 96 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 RGS1Q08116 209 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 DHX9Q08211 1270 aaKnown RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 PWP1Q13610 501 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 THOC5Q13769 683 aaKnown RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 TRIP13Q15645 432 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-209ENST00000553308 CCNG2Q16589 344 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 CATSPEREQ5SY80 951 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ANKRD22Q5VYY1 191 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 RTL6Q6ICC9 239 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ZNF585AQ6P3V2 769 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 PAOXQ6QHF9 649 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 C4orf22Q6V702 233 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 ABHD13Q7L211 337 aa8.45□□□□□ -1.06
SYNE2-209ENST00000553308 GSTA5Q7RTV2 222 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms