RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 KLK4Q9Y5K2 254 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 MALRD1Q5VYJ5 2156 aa5.02□□□□□ -1.61
HOXB3-213ENST00000552000 NCKAP5O14513 1909 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 CUBNO60494 3623 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 FAM166BA8MTA8 275 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 IQCF5A8MTL0 148 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 ARHGEF33A8MVX0 844 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 KLRC4-KLRK1H3BQV0 150 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 H7C0C1 242 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 H7C0S8 307 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 ARHGEF9O43307 516 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 PEX14O75381 377 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 GPC4O75487 556 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 SERPING1P05155 500 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 APOA4P06727 396 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 CYC1P08574 325 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 H2AFZP0C0S5 128 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 TPH1P17752 444 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 CD53P19397 219 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 MSNP26038 577 aaKnown RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 RBL1P28749 1068 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 CMPK1P30085 196 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 CCR7P32248 378 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 ATP5OP48047 213 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 AGTR2P50052 363 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 HLCSP50747 726 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 OR4D2P58180 307 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 MLF1P58340 268 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 SLC26A5P58743 744 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 TSTA3Q13630 321 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 FAM53BQ14153 422 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 TFDP2Q14188 446 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 USP10Q14694 798 aaKnown RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 POU6F1Q14863 301 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 ABRAXAS2Q15018 415 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 KCNMB1Q16558 191 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 ITPRIPL1Q6GPH6 555 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 RTL6Q6ICC9 239 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 DENND5AQ6IQ26 1287 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 TTC23LQ6PF05 361 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 C16orf47Q6ZP98 133 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 LCNL1Q6ZST4 164 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 H2AFVQ71UI9 128 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 PRSS41Q7RTY9 318 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 VN1R5Q7Z5H4 357 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 PAQR7Q86WK9 346 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 PLD3Q8IV08 490 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 P3H2Q8IVL5 708 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 LGI4Q8N135 537 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 KRT222Q8N1A0 295 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 ARHGEF39Q8N4T4 335 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 ZFP62Q8NB50 900 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 OR51Q1Q8NH59 317 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 C16orf52Q8NHV5 167 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 SKA2Q8WVK7 121 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 CTNNBL1Q8WYA6 563 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 P3H4Q92791 437 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 RERGQ96A58 199 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 RAD51AP1Q96B01 352 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 Q96MF0 132 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 SMC6Q96SB8 1091 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 LPAR4Q99677 370 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 C19orf43Q9BQ61 176 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 PLEKHF2Q9H8W4 249 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 TRIM45Q9H8W5 580 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 MRPS30Q9NP92 439 aaKnown RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 BEX4Q9NWD9 120 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 PIH1D1Q9NWS0 290 aaKnown RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 CHMP5Q9NZZ3 219 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 PCYOX1Q9UHG3 505 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 TTC7AQ9ULT0 858 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 RUVBL2Q9Y230 463 aaKnown RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 KLF13Q9Y2Y9 288 aaPredicted RBP5.01□□□□□ -1.61
HOXB3-213ENST00000552000 HYOU1Q9Y4L1 999 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 FAM215AQ9Y5M1 114 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 NFS1Q9Y697 457 aa5.01□□□□□ -1.61
HOXB3-213ENST00000552000 IGKV1-8A0A0C4DH67 115 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 A0A0G2JMM0 328 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 A0A1W2PPB8 328 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 A0A1W2PRS3 328 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 CCDC162PA2VCL2 907 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PINLYPA6NC86 204 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 KIR3DP1A8MWS1 328 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 HACD1B0YJ81 288 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 F8W8V4 182 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 SGK494L7N484 410 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 SYT5O00445 386 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 FCHO1O14526 889 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 TXNDC9O14530 226 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 BCKDKO14874 412 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 HAT1O14929 419 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 SLC16A5O15375 505 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PHF2O75151 1096 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 CDC123O75794 336 aaPredicted RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 NSA2O95478 260 aaKnown RBP5□□□□□ -1.61
HOXB3-213ENST00000552000 C1orf105O95561 183 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 PCSK2P16519 638 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 IL1RNP18510 177 aa5□□□□□ -1.61
HOXB3-213ENST00000552000 TACR1P25103 407 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms