RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 VPS50Q96JG6 964 aa16.41■□□□□ 0.22
CDK4-208ENST00000551706 MAGEB10Q96LZ2 347 aaPredicted RBP16.41■□□□□ 0.22
CDK4-208ENST00000551706 ERVK-6Q9BXR3 956 aa16.41■□□□□ 0.22
CDK4-208ENST00000551706 ADNPQ9H2P0 1102 aa16.41■□□□□ 0.22
CDK4-208ENST00000551706 SEMA3GQ9NS98 782 aa16.41■□□□□ 0.22
CDK4-208ENST00000551706 PCTPQ9UKL6 214 aa16.41■□□□□ 0.22
CDK4-208ENST00000551706 NAALAD2Q9Y3Q0 740 aa16.41■□□□□ 0.22
CDK4-208ENST00000551706 PCDHGA11Q9Y5H2 935 aa16.41■□□□□ 0.22
CDK4-208ENST00000551706 A0A088AWK7 358 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 CCDC151A5D8V7 595 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 SGK494L7N484 410 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 PEX12O00623 359 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 PCDH17O14917 1159 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 GALR3O60755 368 aaPredicted RBP16.4■□□□□ 0.22
CDK4-208ENST00000551706 CLDN9O95484 217 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 UMODP07911 640 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 RPS17P08708 135 aaKnown RBP16.4■□□□□ 0.22
CDK4-208ENST00000551706 SMIM10L1P0DMW3 83 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 ZNF10P21506 573 aaPredicted RBP16.4■□□□□ 0.22
CDK4-208ENST00000551706 IL10P22301 178 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 MMP11P24347 488 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 OTX2P32243 289 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 CCNG1P51959 295 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 TGM3Q08188 693 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 HYAL2Q12891 473 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 DEFB134Q4QY38 66 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 TOR1AIP1Q5JTV8 583 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 PRSS41Q7RTY9 318 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 CROCCP2Q86T23 111 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 MYLK4Q86YV6 388 aaPredicted RBP16.4■□□□□ 0.22
CDK4-208ENST00000551706 L3MBTL4Q8NA19 623 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 OR7G3Q8NG95 312 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 OR51Q1Q8NH59 317 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 GAL3ST3Q96A11 431 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 SMIM10Q96HG1 83 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 CRB3Q9BUF7 120 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 SOX17Q9H6I2 414 aaPredicted RBP16.4■□□□□ 0.22
CDK4-208ENST00000551706 NOL11Q9H8H0 719 aaKnown RBP16.4■□□□□ 0.22
CDK4-208ENST00000551706 PRM3Q9NNZ6 103 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 MKS1Q9NXB0 559 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 TSC22D4Q9Y3Q8 395 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 KCNMB2Q9Y691 235 aa16.4■□□□□ 0.22
CDK4-208ENST00000551706 FOXO6A8MYZ6 492 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 H0YIV9 168 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 DLX3O60479 287 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 OTCP00480 354 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 CYC1P08574 325 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 PCNAP12004 261 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 ARL1P40616 181 aaPredicted RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 CASRP41180 1078 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 PIK3CBP42338 1070 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 RRADP55042 308 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 NAA20P61599 178 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 PHEXP78562 749 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 MAT1AQ00266 395 aaKnown RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 KLC1Q07866 573 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 ADPRMQ3LIE5 342 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 KRT71Q3SY84 523 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 VWA2Q5GFL6 755 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 C10orf62Q5T681 223 aaPredicted RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 TRIM40Q6P9F5 258 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 VN1R5Q7Z5H4 357 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 MRGPREQ86SM8 312 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 TRABD2AQ86V40 505 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 PDSS2Q86YH6 399 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 APLFQ8IW19 511 aaPredicted RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 TMEM102Q8N9M5 508 aaPredicted RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 SRFBP1Q8NEF9 429 aaKnown RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 OR2L5Q8NG80 312 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 RDH11Q8TC12 318 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 PPP4R1Q8TF05 950 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 ZNF483Q8TF39 744 aaPredicted RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 FAR2Q96K12 515 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 FER1L6-AS2Q96M78 137 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 NTMT1Q9BV86 223 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 REXO4Q9GZR2 422 aaKnown RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 IQCGQ9H095 443 aaKnown RBP16.39■□□□□ 0.21
CDK4-208ENST00000551706 SENP1Q9P0U3 644 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 MID2Q9UJV3 735 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 C3orf18Q9UK00 162 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 FER1L5A0AVI2 2057 aa16.39■□□□□ 0.21
CDK4-208ENST00000551706 OR7A17O14581 309 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 ERI3O43414 337 aaKnown RBP16.38■□□□□ 0.21
CDK4-208ENST00000551706 PLIN3O60664 434 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 RDH16O75452 317 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 BMP10O95393 424 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 PROCP04070 461 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 MYL2P10916 166 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 IMPDH1P20839 514 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 PRKAA2P54646 552 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 POLE2P56282 527 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 RAB8AP61006 207 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 SNRPNP63162 240 aaKnown RBP16.38■□□□□ 0.21
CDK4-208ENST00000551706 SYT16Q17RD7 645 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 TMEM35AQ53FP2 167 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 ZNF678Q5SXM1 525 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 HIST2H2BCQ6DN03 193 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 ZYG11AQ6WRX3 759 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 SHISA6Q6ZSJ9 500 aa16.38■□□□□ 0.21
CDK4-208ENST00000551706 CHSY3Q70JA7 882 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms