RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TTC23LQ6PF05 361 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TMEM207Q6UWW9 146 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CYHR1Q6ZMK1 362 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SH2D5Q6ZV89 423 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 PIWIL4Q7Z3Z4 852 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CMC1Q7Z7K0 106 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 ADAMTSL2Q86TH1 951 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SLC9B2Q86UD5 537 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 VRK3Q8IV63 474 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 DCUN1D3Q8IWE4 304 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CPNE9Q8IYJ1 553 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TBC1D21Q8IYX1 336 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CENPLQ8N0S6 344 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 OR5K2Q8NHB8 316 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CCL4L1Q8NHW4 92 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 ZFP28Q8NHY6 868 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 STAG3L4Q8TBR4 150 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 MAPK15Q8TD08 544 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 MCOLN3Q8TDD5 553 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 NAT14Q8WUY8 206 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SKA2Q8WVK7 121 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TFGQ92734 400 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 NAT6Q93015 286 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 KIAA1191Q96A73 305 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 FAM136AQ96C01 138 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 RMDN2Q96LZ7 410 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TSNARE1Q96NA8 513 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SH3GL2Q99962 352 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 RAB11FIP5Q9BXF6 653 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TRIM54Q9BYV2 358 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 WWP1Q9H0M0 922 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TFB2MQ9H5Q4 396 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 STN1Q9H668 368 aaKnown RBP5.55□□□□□ -1.52
SCAF11-213ENST00000550629 KIR3DX1Q9H7L2 352 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 IL21RQ9HBE5 538 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 PARVBQ9HBI1 364 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 SLC40A1Q9NP59 571 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 PRDM8Q9NQV8 689 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 ZNF446Q9NWS9 450 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CPNE7Q9UBL6 633 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CTNNAL1Q9UBT7 734 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TBK1Q9UHD2 729 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 DCDC2Q9UHG0 476 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 TMCO1Q9UM00 188 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 WDR37Q9Y2I8 494 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 PLEKHM1Q9Y4G2 1056 aa5.55□□□□□ -1.52
SCAF11-213ENST00000550629 CENPVL1A0A0U1RR11 272 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 PABPN1LA6NDY0 278 aaKnown RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 LILRA5A6NI73 299 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 SYCE1LA8MT33 242 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 HMGB1P1B2RPK0 211 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 B4DGG1 531 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 DIRC3C9JPN6 131 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 AGPSO00116 658 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 BTN3A1O00481 513 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 RNASET2O00584 256 aaKnown RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 TRIM38O00635 465 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 FFAR2O15552 330 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ZBTB14O43829 449 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 KERAO60938 352 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 GLRA3O75311 464 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 NCR1O76036 304 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 C1orf105O95561 183 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 EML2O95834 649 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 VIPP01282 170 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 GP1BAP07359 652 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 RBP1P09455 135 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 HIST1H2AGP0C0S8 130 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CDK4P11802 303 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CKMT1AP12532 417 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CD59P13987 128 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CD1DP15813 335 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ALOX15P16050 662 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 HIST1H2ADP20671 130 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CYP2A7P20853 494 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 SHMT2P34897 504 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 HNMTP50135 292 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 PER3P56645 1201 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CLRN1P58418 232 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 IL9RQ01113 521 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ABRQ12979 859 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ILKQ13418 452 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 KRT33BQ14525 404 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CLCA4Q14CN2 919 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 CLPPQ16740 277 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 PPP1R3AQ16821 1122 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 PDCD4Q53EL6 469 aaKnown RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 STPG1Q5TH74 334 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 METTL2BQ6P1Q9 378 aaKnown RBP5.54□□□□□ -1.52
SCAF11-213ENST00000550629 KLHL35Q6PF15 583 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 PCSK4Q6UW60 755 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 SBSNQ6UWP8 590 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ASCL5Q7RTU5 278 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 ISCA2Q86U28 154 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 GATAD2AQ86YP4 633 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 GPSM1Q86YR5 675 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 NAXDQ8IW45 347 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 SLC35F3Q8IY50 421 aa5.54□□□□□ -1.52
SCAF11-213ENST00000550629 SRRM1Q8IYB3 904 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms