RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 IFT80Q9P2H3 777 aaPredicted RBP16.34■□□□□ 0.21
BRF1-217ENST00000550375 GPN3Q9UHW5 284 aaPredicted RBP16.34■□□□□ 0.21
BRF1-217ENST00000550375 FIS1Q9Y3D6 152 aa16.34■□□□□ 0.21
BRF1-217ENST00000550375 TSC22D4Q9Y3Q8 395 aa16.34■□□□□ 0.21
BRF1-217ENST00000550375 SLC22A7Q9Y694 548 aa16.34■□□□□ 0.21
BRF1-217ENST00000550375 FREM2Q5SZK8 3169 aa16.34■□□□□ 0.21
BRF1-217ENST00000550375 C9J4A7 227 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 RRP8O43159 456 aaKnown RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 RDH16O75452 317 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 LYPLA1O75608 230 aaPredicted RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 KLHL18O94889 574 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 PDYNP01213 254 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 SERPINE1P05121 402 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 SERPINB3P29508 390 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 ARRB2P32121 409 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 MAT1AQ00266 395 aaKnown RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 DNASE1L3Q13609 305 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 SYT16Q17RD7 645 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 FAM198BQ6UWH4 519 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 ZNF517Q6ZMY9 492 aaPredicted RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 CHSY3Q70JA7 882 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 COX15Q7KZN9 410 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 SPACA3Q8IXA5 215 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 AFAP1L2Q8N4X5 818 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 KDF1Q8NAX2 398 aaPredicted RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 OR6Y1Q8NGX8 325 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 GAL3ST3Q96A11 431 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 KIAA1143Q96AT1 154 aaPredicted RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 MVB12AQ96EY5 273 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 FAR2Q96K12 515 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 HBEGFQ99075 208 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 C17orf62Q9BQA9 187 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 SLC29A3Q9BZD2 475 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 DPH1Q9BZG8 443 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 GPN2Q9H9Y4 310 aaPredicted RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 EML4Q9HC35 981 aaKnown RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 HCN3Q9P1Z3 774 aa16.33■□□□□ 0.2
BRF1-217ENST00000550375 ANKRD11Q6UB99 2663 aaPredicted RBP16.33■□□□□ 0.2
BRF1-217ENST00000550375 DYNC1I1O14576 645 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 ITM2AO43736 263 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 GALR3O60755 368 aaPredicted RBP16.32■□□□□ 0.2
BRF1-217ENST00000550375 NSA2O95478 260 aaKnown RBP16.32■□□□□ 0.2
BRF1-217ENST00000550375 ETHE1O95571 254 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 KRT6AP02538 564 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 KRT6BP04259 564 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 SMIM10L1P0DMW3 83 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 PIM1P11309 404 aaPredicted RBP16.32■□□□□ 0.2
BRF1-217ENST00000550375 LIFP15018 202 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 F8A1P23610 371 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 KRT6CP48668 564 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 HTR6P50406 440 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 PPP2R2AP63151 447 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 OLR1P78380 273 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 BTN3A2P78410 334 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 ADPRMQ3LIE5 342 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 KHDRBS2Q5VWX1 349 aaKnown RBP16.32■□□□□ 0.2
BRF1-217ENST00000550375 CLEC6AQ6EIG7 209 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 TRIM40Q6P9F5 258 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 SCIMPQ6UWF3 145 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 ATG14Q6ZNE5 492 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 LRRC69Q6ZNQ3 347 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 ENDOVQ8N8Q3 282 aaKnown RBP16.32■□□□□ 0.2
BRF1-217ENST00000550375 AMER3Q8N944 861 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 OR2L5Q8NG80 312 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 AGR3Q8TD06 166 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 SMIM10Q96HG1 83 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 ZNF395Q9H8N7 513 aaPredicted RBP16.32■□□□□ 0.2
BRF1-217ENST00000550375 IL17BQ9UHF5 180 aa16.32■□□□□ 0.2
BRF1-217ENST00000550375 MRPS18BQ9Y676 258 aaKnown RBP16.32■□□□□ 0.2
BRF1-217ENST00000550375 TMEM114B3SHH9 223 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 H3BQF6 201 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 FOXE1O00358 373 aaPredicted RBP16.31■□□□□ 0.2
BRF1-217ENST00000550375 RTCAO00442 366 aaKnown RBP16.31■□□□□ 0.2
BRF1-217ENST00000550375 DNAJB6O75190 326 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 ULK1O75385 1050 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 HSPA4LO95757 839 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 PTX3P26022 381 aaPredicted RBP16.31■□□□□ 0.2
BRF1-217ENST00000550375 ITPKBP27987 946 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 SERPINB5P36952 375 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 RAP1GDS1P52306 607 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 FOXL2P58012 376 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 RPS18P62269 152 aaKnown RBP16.31■□□□□ 0.2
BRF1-217ENST00000550375 RPS15P62841 145 aaKnown RBP16.31■□□□□ 0.2
BRF1-217ENST00000550375 TGM3Q08188 693 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 STX3Q13277 289 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 DSG2Q14126 1118 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 NCF4Q15080 339 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 TMEM35AQ53FP2 167 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 DEPDC1Q5TB30 811 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 FAM69BQ5VUD6 431 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 ABHD17CQ6PCB6 329 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 OVCH1Q7RTY7 1134 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 UBE3DQ7Z6J8 389 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 SHISA5Q8N114 240 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 OR5T3Q8NGG3 340 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 SORBS1Q9BX66 1292 aaKnown RBP16.31■□□□□ 0.2
BRF1-217ENST00000550375 TRPC4Q9UBN4 977 aa16.31■□□□□ 0.2
BRF1-217ENST00000550375 CTSFQ9UBX1 484 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms