RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SOX17Q9H6I2 414 aaPredicted RBP18.33■□□□□ 0.52
DDX54-207ENST00000550016 CLK4Q9HAZ1 481 aaKnown RBP18.33■□□□□ 0.52
DDX54-207ENST00000550016 PRM3Q9NNZ6 103 aa18.33■□□□□ 0.52
DDX54-207ENST00000550016 C14orf105Q9NVL8 296 aa18.33■□□□□ 0.52
DDX54-207ENST00000550016 HCN3Q9P1Z3 774 aa18.33■□□□□ 0.52
DDX54-207ENST00000550016 SPAG7O75391 227 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 B3GALT4O96024 378 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 TSPAN8P19075 237 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 DNAJB13P59910 316 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 NAA20P61599 178 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 ZRSR2Q15696 482 aaKnown RBP18.32■□□□□ 0.52
DDX54-207ENST00000550016 BORAQ6PGQ7 559 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 CHSY3Q70JA7 882 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 PRSS58Q8IYP2 241 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 OR2L5Q8NG80 312 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 OR4F6Q8NGB9 312 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 HUS1BQ8NHY5 278 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 TRPC4APQ8TEL6 797 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 TTC9Q92623 222 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 EXTL1Q92935 676 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 NACC2Q96BF6 587 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 CMTM7Q96FZ5 175 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 FAR2Q96K12 515 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 F2RL3Q96RI0 385 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 CENPHQ9H3R5 247 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 ACSS2Q9NR19 701 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 SEMA3GQ9NS98 782 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 OXSMQ9NWU1 459 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 CACNA1GO43497 2377 aa18.32■□□□□ 0.52
DDX54-207ENST00000550016 A0A088AWK7 358 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 ZNF860A6NHJ4 632 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 C4orf51C9J302 202 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 PPP6CO00743 305 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 ERI3O43414 337 aaKnown RBP18.31■□□□□ 0.52
DDX54-207ENST00000550016 BMP10O95393 424 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 MLYCDO95822 493 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 TGFB1P01137 390 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 IGHEP01854 428 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 CREB1P16220 341 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 ZNF10P21506 573 aaPredicted RBP18.31■□□□□ 0.52
DDX54-207ENST00000550016 BTN3A2P78410 334 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 PHEXP78562 749 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 TGM3Q08188 693 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 DDX39BQ13838 428 aaKnown RBP18.31■□□□□ 0.52
DDX54-207ENST00000550016 GGTA1PQ4G0N0 100 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 TMEM35AQ53FP2 167 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 TRIM40Q6P9F5 258 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 LAPTM4BQ86VI4 370 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 ZC3H7AQ8IWR0 971 aaKnown RBP18.31■□□□□ 0.52
DDX54-207ENST00000550016 CCNYL1Q8N7R7 359 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 SRFBP1Q8NEF9 429 aaKnown RBP18.31■□□□□ 0.52
DDX54-207ENST00000550016 ARMC2Q8NEN0 867 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 MYRIPQ8NFW9 859 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 WDR20Q8TBZ3 569 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 APOBEC4Q8WW27 367 aaKnown RBP18.31■□□□□ 0.52
DDX54-207ENST00000550016 PGM2Q96G03 612 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 ZNF382Q96SR6 550 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 MTERF1Q99551 399 aaKnown RBP18.31■□□□□ 0.52
DDX54-207ENST00000550016 CRB3Q9BUF7 120 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 PSD3Q9NYI0 1048 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 MAN2B2Q9Y2E5 1009 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 STK38LQ9Y2H1 464 aa18.31■□□□□ 0.52
DDX54-207ENST00000550016 LOC400499M0QZD8 3231 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 DOCK10Q96BY6 2186 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 A0A1B0GTL3 188 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 ERVH48-1M5A8F1 160 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 FOXE1O00358 373 aaPredicted RBP18.3■□□□□ 0.52
DDX54-207ENST00000550016 CHST10O43529 356 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 IL10P22301 178 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 MMP11P24347 488 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 PTX3P26022 381 aaPredicted RBP18.3■□□□□ 0.52
DDX54-207ENST00000550016 CCR10P46092 362 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 XCR1P46094 333 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 PLA2G16P53816 162 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 NAGLUP54802 743 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 EMP2P54851 167 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 TNFAIP8L3Q5GJ75 292 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 C10orf62Q5T681 223 aaPredicted RBP18.3■□□□□ 0.52
DDX54-207ENST00000550016 DEPDC1Q5TB30 811 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 TTC19Q6DKK2 380 aaPredicted RBP18.3■□□□□ 0.52
DDX54-207ENST00000550016 LETMD1Q6P1Q0 360 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 ABHD17CQ6PCB6 329 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 PPP1R32Q7Z5V6 425 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 MRGPREQ86SM8 312 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 EXOC3L1Q86VI1 746 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 RNF175Q8N4F7 328 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 OR5T3Q8NGG3 340 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 TCP10LQ8TDR4 215 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 QRFPRQ96P65 431 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 FAM111AQ96PZ2 611 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 GSTO2Q9H4Y5 243 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 DMRT3Q9NQL9 472 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 SLC17A7Q9P2U7 560 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 TRPS1Q9UHF7 1281 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 C3orf18Q9UK00 162 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 KCNMB2Q9Y691 235 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 PCSK5Q92824 1860 aa18.3■□□□□ 0.52
DDX54-207ENST00000550016 A0A0G2JN53 185 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 MAGEB17A8MXT2 336 aa18.29■□□□□ 0.52
DDX54-207ENST00000550016 IDSB3KWA1 339 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms