RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 GPATCH1Q9BRR8 931 aaKnown RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 GIN1Q9NXP7 522 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 ATG2BQ96BY7 2078 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 OR6A2O95222 327 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 KLF8O95600 359 aaPredicted RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 C9P02748 559 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 MPC1LP0DKB6 136 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 DPP6P42658 865 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 HK3P52790 923 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 RPS3AP61247 264 aaKnown RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 HACD2Q6Y1H2 254 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 VRK3Q8IV63 474 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 FGF13Q92913 245 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 BTBD1Q9H0C5 482 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 KAT8Q9H7Z6 458 aaKnown RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 TAS2R9Q9NYW1 312 aa14.44□□□□□ -0.1
CUX1-214ENST00000550008 ZNF624Q9P2J8 865 aaPredicted RBP14.44□□□□□ -0.1
CUX1-214ENST00000550008 A8MUA0 341 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 CASKO14936 926 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 HNRNPA1P09651 372 aaKnown RBP eCLIP14.43□□□□□ -0.1
CUX1-214ENST00000550008 MLLT1Q03111 559 aaPredicted RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 GRIK2Q13002 908 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 RNASE12Q5GAN4 147 aaKnown RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 ATG9BQ674R7 924 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 PRR23BQ6ZRT6 265 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 FAM98AQ8NCA5 519 aaKnown RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 RAB2BQ8WUD1 216 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 HSPBAP1Q96EW2 488 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 CEP295NLQ96MC4 621 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 SLC38A3Q99624 504 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 KCNS3Q9BQ31 491 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 DPH7Q9BTV6 452 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 CXXC1Q9P0U4 656 aaPredicted RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 CHURC1-FNTBB4DL54 471 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 CD1EP15812 388 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 PSMA1P25786 263 aaKnown RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 AKT2P31751 481 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 MAP2K4P45985 399 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 CLCN7P51798 805 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 TAB1Q15750 504 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 TIGD6Q17RP2 521 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 KIAA1161Q6NSJ0 714 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 USP30Q70CQ3 517 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 ZNF761Q86XN6 746 aaPredicted RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 GPR135Q8IZ08 494 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 UXS1Q8NBZ7 420 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 FBXO15Q8NCQ5 510 aaPredicted RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 GEMIN6Q8WXD5 167 aaKnown RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 GATA6Q92908 595 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 ALPK1Q96QP1 1244 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 DNAJC27Q9NZQ0 273 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 A0A1B0GTL3 188 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 RASAL1O95294 804 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 MAGEA12P43365 314 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 ENTPD1P49961 510 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 SLC7A9P82251 487 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 OR4N5Q8IXE1 308 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 PMEPA1Q969W9 287 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 TBC1D17Q9HA65 648 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 KCNK12Q9HB15 430 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 TIMMDC1Q9NPL8 285 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 POLR1DQ9Y2S0 133 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 CAB39Q9Y376 341 aaPredicted RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 LOC110117498-PIK3R3F6TDL0 507 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 H3BNH8 94 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 B3GALT2O43825 422 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 CDC123O75794 336 aaPredicted RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 ABLIM3O94929 683 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 C1SP09871 688 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 SBK3P0C264 359 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 RPS3P23396 243 aaKnown RBP eCLIP14.43□□□□□ -0.1
CUX1-214ENST00000550008 ZNF846Q147U1 533 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 DEFB134Q4QY38 66 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 SBSNQ6UWP8 590 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 LRIG1Q96JA1 1093 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 ZNF347Q96SE7 839 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 POLR2J2Q9GZM3 115 aaKnown RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 TRNAU1APQ9NX07 287 aaKnown RBP14.43□□□□□ -0.1
CUX1-214ENST00000550008 IRAK3Q9Y616 596 aa14.43□□□□□ -0.1
CUX1-214ENST00000550008 EFCAB9A8MZ26 197 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 H1F0P07305 194 aaKnown RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 OR12D1P0DN82 309 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 CST6Q15828 149 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 AAK1Q2M2I8 961 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 NAGSQ8N159 534 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 TSACCQ96A04 125 aaPredicted RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 ZNF689Q96CS4 500 aaPredicted RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 UBAP1Q9NZ09 502 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 RIMS3Q9UJD0 308 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 TBX1O43435 398 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 ASGR2P07307 311 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 SRP54P61011 504 aaKnown RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 PYDC2Q56P42 97 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 FGD2Q7Z6J4 655 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 PEX5LQ8IYB4 626 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 CBARPQ8N350 705 aaPredicted RBP14.42□□□□□ -0.1
CUX1-214ENST00000550008 OR8K5Q8NH50 307 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 ISL2Q96A47 359 aa14.42□□□□□ -0.1
CUX1-214ENST00000550008 TOX2Q96NM4 488 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms