RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 GAL3ST3Q96A11 431 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 PNPLA2Q96AD5 504 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 LRRC39Q96DD0 335 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 MVB12AQ96EY5 273 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 CCDC138Q96M89 665 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 RUNDC3BQ96NL0 473 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 NAPGQ99747 312 aaPredicted RBP6.31□□□□□ -1.4
TMEM116-208ENST00000549537 OLFM1Q99784 485 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 MCMBPQ9BTE3 642 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 SGPP1Q9BX95 441 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 ZBTB20Q9HC78 741 aaPredicted RBP6.31□□□□□ -1.4
TMEM116-208ENST00000549537 ZNF304Q9HCX3 659 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 SEMA3GQ9NS98 782 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 TAS2R13Q9NYV9 303 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 MOCS1Q9NZB8 636 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 TRMT6Q9UJA5 497 aaKnown RBP6.31□□□□□ -1.4
TMEM116-208ENST00000549537 FBXL4Q9UKA2 621 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 NXT1Q9UKK6 140 aaKnown RBP6.31□□□□□ -1.4
TMEM116-208ENST00000549537 IKZF3Q9UKT9 509 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 CHMP2BQ9UQN3 213 aa6.31□□□□□ -1.4
TMEM116-208ENST00000549537 RUVBL1Q9Y265 456 aaKnown RBP6.31□□□□□ -1.4
TMEM116-208ENST00000549537 DOCK10Q96BY6 2186 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 KCNE1BA0A087WTH5 132 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 H7BY64 318 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 PEX12O00623 359 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 SLC16A5O15375 505 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 ALOX12BO75342 701 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 SYF2O95926 243 aaKnown RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 C1QAP02745 245 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 EIF2S1P05198 315 aaKnown RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 COX6A1P12074 109 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 NPPBP16860 134 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 FBLP22087 321 aaKnown RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 UQCRFS1P47985 274 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 CSNK1G2P78368 415 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 KLC1Q07866 573 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 AIMP2Q13155 320 aaKnown RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 TSTA3Q13630 321 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 FAM53BQ14153 422 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 MPP2Q14168 576 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 PLEKHN1Q494U1 663 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 VWA2Q5GFL6 755 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 HECTD2Q5U5R9 776 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 GARNL3Q5VVW2 1013 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 PRAMEF13Q5VWM6 474 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 UGT3A1Q6NUS8 523 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 AGTRAPQ6RW13 159 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 SBSNQ6UWP8 590 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 TMEM207Q6UWW9 146 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 BNC2Q6ZN30 1099 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 GK5Q6ZS86 529 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 CPT1CQ8TCG5 803 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 MCOLN3Q8TDD5 553 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 TM4SF19Q96DZ7 209 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 LINGO1Q96FE5 620 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 SNF8Q96H20 258 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 PDLIM5Q96HC4 596 aaKnown RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 CABS1Q96KC9 395 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 PRAP1Q96NZ9 151 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 OR4K3Q96R72 315 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 SERINC2Q96SA4 455 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 BARD1Q99728 777 aaKnown RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 PARVBQ9HBI1 364 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 CCDC177Q9NQR7 707 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 TMEM184CQ9NVA4 438 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 RNF14Q9UBS8 474 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 ZNF282Q9UDV7 671 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 CDC23Q9UJX2 597 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 CORO1CQ9ULV4 474 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 VWA7Q9Y334 891 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 MRPS2Q9Y399 296 aaKnown RBP6.3□□□□□ -1.4
TMEM116-208ENST00000549537 SPEF1Q9Y4P9 236 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 CSAG2Q9Y5P2 127 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 PSAT1Q9Y617 370 aa6.3□□□□□ -1.4
TMEM116-208ENST00000549537 LOC102723996A0A087X1L8 192 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 A0A0A6YYC8 382 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 EFCAB8A8MWE9 144 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 I3L1I5 382 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 TXNDC9O14530 226 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 FFAR3O14843 346 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 GPR42O15529 346 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 LCMT2O60294 686 aaKnown RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 WISP3O95389 354 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 HPP00738 406 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 ZNF37AP17032 561 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 HRH2P25021 359 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 BCL6P41182 706 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 RGS4P49798 205 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 AP1S2P56377 157 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 ARL4CP56559 192 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 IL2P60568 153 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 RPS15AP62244 130 aaKnown RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 MRPS25P82663 173 aaKnown RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 OCA2Q04671 838 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 PDIA2Q13087 525 aaKnown RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 NAE1Q13564 534 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 KRT72Q14CN4 511 aa6.29□□□□□ -1.4
TMEM116-208ENST00000549537 INPP5JQ15735 1006 aaPredicted RBP6.29□□□□□ -1.4
TMEM116-208ENST00000549537 RBBP7Q16576 425 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms