RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	SRFBP1	Q8NEF9	429 aa	Known RBP	11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	DEFB124	Q8NES8	71 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	TMEM74	Q96NL1	305 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	QRFPR	Q96P65	431 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	KCNC2	Q96PR1	638 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	C17orf62	Q9BQA9	187 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	TBCD	Q9BTW9	1192 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	LHX9	Q9NQ69	397 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	MRGBP	Q9NV56	204 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	TOR4A	Q9NXH8	423 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	GPR45	Q9Y5Y3	372 aa		11.64	□□□□□ -0.55
ERBB3-208	ENST00000549205	FITM1	A5D6W6	292 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	TMEM150C	B9EJG8	249 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	RTCA	O00442	366 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	SLC22A2	O15244	555 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	PCDH7	O60245	1069 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	EED	O75530	441 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	ANXA4	P09525	319 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	SMIM10L1	P0DMW3	83 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	G6PD	P11413	515 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	PCSK2	P16519	638 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	SDC1	P18827	310 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	CSRP1	P21291	193 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	CCKBR	P32239	447 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	SSR2	P43308	183 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	TSFM	P43897	325 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	PLA2G16	P53816	162 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	INSM1	Q01101	510 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	RPS6KA2	Q15349	733 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	PDCD4	Q53EL6	469 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	FAM91A1	Q658Y4	838 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	OR4C11	Q6IEV9	310 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	CYP20A1	Q6UW02	462 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	ABHD13	Q7L211	337 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	TRPM8	Q7Z2W7	1104 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	CLNK	Q7Z7G1	428 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	NUDT13	Q86X67	352 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	FAM9C	Q8IZT9	166 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	MIER2	Q8N344	545 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	LIX1	Q8N485	282 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	ARHGEF39	Q8N4T4	335 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	FITM2	Q8N6M3	262 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	ZCCHC10	Q8TBK6	192 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	NETO1	Q8TDF5	533 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	UTP15	Q8TED0	518 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	ERP27	Q96DN0	273 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	SMIM10	Q96HG1	83 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	TEFM	Q96QE5	360 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	SORBS1	Q9BX66	1292 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	EBPL	Q9BY08	206 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	DDX31	Q9H8H2	851 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	FANCE	Q9HB96	536 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	PRDM7	Q9NQW5	492 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	FGF21	Q9NSA1	209 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	STARD5	Q9NSY2	213 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	SIDT1	Q9NXL6	827 aa	Known RBP	11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	ARMCX1	Q9P291	453 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	RAPGEFL1	Q9UHV5	662 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	MCM8	Q9UJA3	840 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	ADAM29	Q9UKF5	820 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	SLC22A7	Q9Y694	548 aa		11.63	□□□□□ -0.55
ERBB3-208	ENST00000549205	NUP210L	Q5VU65	1888 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205		A0A0G2JN53	185 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	GNG14	A0A1W2PPG7	69 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205		H3BMH7	237 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	TMX2-CTNND1	H3BSU7	103 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	OR2B3	O76000	313 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	SCEL	O95171	688 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	KLK1	P06870	262 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	CDK4	P11802	303 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	ALOX12	P18054	663 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	GPX3	P22352	226 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	HIST1H1T	P22492	207 aa	Predicted RBP	11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	TACR1	P25103	407 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	ATP5A1	P25705	553 aa	Known RBP	11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	TPP2	P29144	1249 aa	Predicted RBP	11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	ADSL	P30566	484 aa	Predicted RBP	11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	CSTF2	P33240	577 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	EMP3	P54852	163 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	ITGA1	P56199	1179 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	RAB8A	P61006	207 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	ACY1	Q03154	408 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	KLF10	Q13118	480 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	GRM7	Q14831	915 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	PTGR1	Q14914	329 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	C16orf72	Q14CZ0	275 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	HERC3	Q15034	1050 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	CCNYL2	Q5T2Q4	361 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	GARNL3	Q5VVW2	1013 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	CDCP2	Q5VXM1	449 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	C6orf89	Q6UWU4	347 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	KIAA2013	Q8IYS2	634 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	AGBL5	Q8NDL9	886 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	OR1L3	Q8NH93	324 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	ZNF501	Q96CX3	271 aa	Predicted RBP	11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	CCDC106	Q9BWC9	280 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	ROGDI	Q9GZN7	287 aa		11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	SPRTN	Q9H040	489 aa	Predicted RBP	11.62	□□□□□ -0.55
ERBB3-208	ENST00000549205	IRAK4	Q9NWZ3	460 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms