RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CHKBQ9Y259 395 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SNX10Q9Y5X0 201 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 OR5K3A6NET4 321 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 TLCD2A6NGC4 264 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 H3BM21 787 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 UBXN7O94888 489 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 MT-CYBP00156 380 aaPredicted RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 GPIP06744 558 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CAPN1P07384 714 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 APRTP07741 180 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 ETS2P15036 469 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CXCR5P32302 372 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CSTF2P33240 577 aaKnown RBP eCLIP4.65□□□□□ -1.665e-9■■■■□ 25.1
SCAF11-212ENST00000549162 GAS1P54826 345 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CTBP2P56545 445 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CXCR4P61073 352 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 ST8SIA6P61647 398 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 PLK5Q496M5 336 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 KHDC1Q4VXA5 237 aaKnown RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 ANXA8L1Q5VT79 327 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SEL1L3Q68CR1 1132 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 TRIM68Q6AZZ1 485 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CNSTQ6PJW8 725 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 GKN2Q86XP6 184 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 MIB1Q86YT6 1006 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SPATA22Q8NHS9 363 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 NUBPLQ8TB37 319 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 FAM149B1Q96BN6 582 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 REXO5Q96IC2 774 aaKnown RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 RSRC1Q96IZ7 334 aaKnown RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 NUDT16L1Q9BRJ7 211 aaKnown RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 ILKAPQ9H0C8 392 aaPredicted RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CCDC86Q9H6F5 360 aaKnown RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 YY1AP1Q9H869 796 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 DNAJC11Q9NVH1 559 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SLC2A6Q9UGQ3 507 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 LRRC42Q9Y546 428 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 H3BML4 177 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 COPEO14579 308 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 PIAS2O75928 621 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 TRIM16O95361 564 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 FUCA1P04066 466 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 WNT1P04628 370 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 SP9P0CG40 484 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 OSMP13725 252 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 CD22P20273 847 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 S1PR1P21453 382 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 SAT1P21673 171 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 OPRM1P35372 400 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 ECI1P42126 302 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 RBM34P42696 430 aaKnown RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 CSNK1EP49674 416 aaKnown RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 PHEXP78562 749 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 TEX35Q5T0J7 233 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 ARMC4Q5T2S8 1044 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 OGFRL1Q5TC84 451 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 IGFL3Q6UXB1 125 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 EP400NLQ6ZTU2 488 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 FUNDC1Q8IVP5 155 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 DENND6AQ8IWF6 608 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 VWA5B2Q8N398 1253 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 MORN4Q8NDC4 146 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 NAT6Q93015 286 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 DTNBP1Q96EV8 351 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 PDXPQ96GD0 296 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 C20orf27Q9GZN8 174 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 RIC8BQ9NVN3 520 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 ARL5AQ9Y689 179 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 CYR61O00622 381 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 SCAMP2O15127 329 aaKnown RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 POLR1CO15160 346 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 ACOX3O15254 700 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 HCRTR2O43614 444 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 NUDT14O95848 222 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 TXNDC12O95881 172 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 TNFP01375 233 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 IGKV3-11P04433 115 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 ANXA5P08758 320 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 JUNBP17275 347 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 MAGOHP61326 146 aaKnown RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 CSNK1G2P78368 415 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 SPEM2Q0P670 501 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 MAPK11Q15759 364 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 SMAD1Q15797 465 aaKnown RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 C14orf28Q4W4Y0 310 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 KLHL7Q8IXQ5 586 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 ZNF595Q8IYB9 648 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 NFAM1Q8NET5 270 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 CEP70Q8NHQ1 597 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 M1APQ8TC57 530 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 AUTS2Q8WXX7 1259 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 RCC1LQ96I51 464 aaKnown RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 B3GALT6Q96L58 329 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 EPYCQ99645 322 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 C17orf62Q9BQA9 187 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 SLC25A23Q9BV35 468 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 TRIM15Q9C019 465 aa4.65□□□□□ -1.67
SCAF11-212ENST00000549162 C20orf96Q9NUD7 363 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 C6orf203Q9P0P8 240 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-212ENST00000549162 PHF11Q9UIL8 331 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms