RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 ZNF24P17028 368 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 ZNF37AP17032 561 aaPredicted RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 GABRB3P28472 473 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 TRHRP34981 398 aaPredicted RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 HLCSP50747 726 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 KCNK10P57789 538 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 REEP5Q00765 189 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 TBL3Q12788 808 aaKnown RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 PDIA2Q13087 525 aaKnown RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 RBM20Q5T481 1227 aaKnown RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 STEAP4Q687X5 459 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 RGS9BPQ6ZS82 235 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 CEP128Q6ZU80 1094 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 LANCL3Q6ZV70 420 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 GDF7Q7Z4P5 450 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 TMPRSS11BQ86T26 416 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 KLHL7Q8IXQ5 586 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 OR5L2Q8NGL0 311 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 UTP15Q8TED0 518 aaKnown RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 DAZLQ92904 295 aaKnown RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 SCMH1Q96GD3 660 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 KRT12Q99456 494 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 EFCAB11Q9BUY7 163 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 SLC6A16Q9GZN6 736 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 DERL2Q9GZP9 239 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 RHOJQ9H4E5 214 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 TRIM45Q9H8W5 580 aaPredicted RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 KLHL1Q9NR64 748 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 LANCL2Q9NS86 450 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 ADGRE2Q9UHX3 823 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 CLCA3PQ9Y6N3 262 aa9.05□□□□□ -0.96
GCN1-205ENST00000548821 USP9XQ93008 2570 aaPredicted RBP9.05□□□□□ -0.96
GCN1-205ENST00000548821 PCM1Q15154 2024 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 IGHV3-20A0A0C4DH32 117 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 TCRBV16S1A1N1A0A5B0 115 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 ARHGAP10A1A4S6 786 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 FAM187AA6NFU0 413 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 ZFAND5O76080 213 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 WDR47O94967 919 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SEC31AO94979 1220 aaKnown RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 COX7A2P14406 83 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 STMN1P16949 149 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 ELAVL4P26378 380 aaKnown RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 HTR1EP28566 365 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SPRP35270 261 aaPredicted RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 ITGA8P53708 1063 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 RAB8AP61006 207 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 BTN3A2P78410 334 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 STX4Q12846 297 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SLC13A2Q13183 592 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 CBLBQ13191 982 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SERTAD2Q14140 314 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 ZNF630Q2M218 657 aaPredicted RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 CATSPEREQ5SY80 951 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SPINK14Q6IE38 97 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SULT1C3Q6IMI6 304 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SBSNQ6UWP8 590 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 MBOAT1Q6ZNC8 495 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 CHSY3Q70JA7 882 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 PRSS41Q7RTY9 318 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 ZC3HC1Q86WB0 502 aaKnown RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 PDSS2Q86YH6 399 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 GPSM1Q86YR5 675 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 TMEM151BQ8IW70 566 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 ZBED8Q8IZ13 594 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 MDS2Q8NDY4 140 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 FBXO36Q8NEA4 188 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 B3GNT7Q8NFL0 401 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 STAG3L4Q8TBR4 150 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 CCT6BQ92526 530 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 VMP1Q96GC9 406 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 CAPZA3Q96KX2 299 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 TSNARE1Q96NA8 513 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SERINC2Q96SA4 455 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 CPNE1Q99829 537 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 MACROD1Q9BQ69 325 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 REXO4Q9GZR2 422 aaKnown RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 GRPEL1Q9HAV7 217 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 DNAJC11Q9NVH1 559 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.04□□□□□ -0.964e-6■□□□□ 11
GCN1-205ENST00000548821 TRMT1Q9NXH9 659 aaKnown RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 MS4A12Q9NXJ0 267 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 MOCS1Q9NZB8 636 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 WWOXQ9NZC7 414 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 ERVK-11Q9UQG0 969 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 YARS2Q9Y2Z4 477 aaKnown RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 UTP11Q9Y3A2 253 aaKnown RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 SHANK1Q9Y566 2161 aa9.04□□□□□ -0.96
GCN1-205ENST00000548821 SPTBN1Q01082 2364 aaKnown RBP9.04□□□□□ -0.96
GCN1-205ENST00000548821 SYCE1LA8MT33 242 aa9.03□□□□□ -0.96
GCN1-205ENST00000548821 FAM47E-STBD1D6RA91 191 aa9.03□□□□□ -0.96
GCN1-205ENST00000548821 NPIPA5E9PKD4 350 aa9.03□□□□□ -0.96
GCN1-205ENST00000548821 E9PLN8 166 aa9.03□□□□□ -0.96
GCN1-205ENST00000548821 ACOT7O00154 380 aa9.03□□□□□ -0.96
GCN1-205ENST00000548821 TFECO14948 347 aaPredicted RBP9.03□□□□□ -0.96
GCN1-205ENST00000548821 NME2P1O60361 137 aa9.03□□□□□ -0.96
GCN1-205ENST00000548821 STK16O75716 305 aa9.03□□□□□ -0.96
GCN1-205ENST00000548821 CLDN14O95500 239 aa9.03□□□□□ -0.96
GCN1-205ENST00000548821 STATHP02808 62 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms