RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 PTGES3Q15185 160 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 MED22Q15528 200 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SF1Q15637 639 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TSTQ16762 297 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CRB2Q5IJ48 1285 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 GCNT6Q5T4J0 391 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CST9Q5W186 159 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 RNF180Q86T96 592 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 NPAS4Q8IUM7 802 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC44A2Q8IWA5 706 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 BBS7Q8IWZ6 715 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 UBQLNLQ8IYU4 475 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CELF2-AS1Q8N7Q2 184 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 OR6F1Q8NGZ6 308 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 OR52J3Q8NH60 311 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ASZ1Q8WWH4 475 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 OR5M11Q96RB7 305 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 PIP5K1AQ99755 562 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TAPBPLQ9BX59 468 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SGK2Q9HBY8 427 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CCDC177Q9NQR7 707 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ATP6V1HQ9UI12 483 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF221Q9UK13 617 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TMPRSS11EQ9UL52 423 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 LRFN2Q9ULH4 789 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 WBP11Q9Y2W2 641 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ANAPC1Q9H1A4 1944 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 KRT87PA6NCN2 255 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 PRAMEF25A6NGN4 478 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 ZAR1LA6NP61 321 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 ARHGAP33O14559 1287 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 CAPN5O15484 640 aaPredicted RBP9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 HOXA2O43364 376 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 PSIP1O75475 530 aaKnown RBP9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 UGT2B17O75795 530 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 ABLIM3O94929 683 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 SLCO2B1O94956 709 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 SLITRK5O94991 958 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 ETHE1O95571 254 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 OPN1SWP03999 348 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 SRPRAP08240 638 aaKnown RBP9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 C1SP09871 688 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 ETFAP13804 333 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 TNFRSF1BP20333 461 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 TIA1P31483 386 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 XCR1P46094 333 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 OR1E2P47887 323 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 SPINT3P49223 89 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 OR2B6P58173 313 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 COPZ1P61923 177 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 RHAGQ02094 409 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 DMC1Q14565 340 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 STARD3Q14849 445 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 VEPH1Q14D04 833 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 PLAG1Q6DJT9 500 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 THOC7Q6I9Y2 204 aaKnown RBP9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 GDPGP1Q6ZNW5 385 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 RFLNAQ6ZTI6 216 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 RNF130Q86XS8 419 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 KRT73Q86Y46 540 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 OXR1Q8N573 874 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 OR9Q2Q8NGE9 314 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF461Q8TAF7 563 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 GEMIN6Q8WXD5 167 aaKnown RBP9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 BHMTQ93088 406 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 TP53INP1Q96A56 240 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 SNX18Q96RF0 628 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 TCF25Q9BQ70 676 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 SYT17Q9BSW7 474 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 RACGAP1Q9H0H5 632 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 BRD9Q9H8M2 597 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 DYRK4Q9NR20 520 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 ACER3Q9NUN7 267 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 CLN6Q9NWW5 311 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 SH3BP4Q9P0V3 963 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 FTSJ1Q9UET6 329 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 YIPF1Q9Y548 306 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 PCDHGB2Q9Y5G2 931 aa9.48□□□□□ -0.89
SMARCD1-205ENST00000548573 H3BQ06 376 aaPredicted RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 CTDSP2O14595 271 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 IDH3BO43837 385 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 AP2A2O94973 939 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 CCNB2O95067 398 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 TNFSF8P32971 234 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 HBA1P69905 142 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 EEF1A2Q05639 463 aaKnown RBP9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 LMAN2Q12907 356 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 GPR50Q13585 617 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 E2F2Q14209 437 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SSX1Q16384 188 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 LRRC26Q2I0M4 334 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 COX20Q5RI15 118 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 MPP7Q5T2T1 576 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 TPGS2Q68CL5 300 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 AGTRAPQ6RW13 159 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 ANGPTL8Q6UXH0 198 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SERPINA13PQ6UXR4 307 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 TMC5Q6UXY8 1006 aa9.47□□□□□ -0.89
SMARCD1-205ENST00000548573 SPATC1Q76KD6 591 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms