RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 OLFM1Q99784 485 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 HIST1H2AJQ99878 128 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 H2AFJQ9BTM1 129 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 SPNS1Q9H2V7 528 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 KLHL31Q9H511 634 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 PARVBQ9HBI1 364 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 PNO1Q9NRX1 252 aaKnown RBP11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 KLHL42Q9P2K6 505 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 RNF6Q9Y252 685 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 JRKLQ9Y4A0 524 aa11.18□□□□□ -0.62
TRAFD1-205ENST00000548277 HIVEP1P15822 2718 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 TRBV11-1A0A0K0K1C0 115 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 MYOCOSA0A1B0GUC4 107 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 CTAGE15A4D2H0 777 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 USP27XA6NNY8 438 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 KLRC4-KLRK1H3BQV0 150 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 FCHO1O14526 889 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 FANCGO15287 622 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 C8GP07360 202 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 TFEBP19484 476 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 IL10P22301 178 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 JAK1P23458 1154 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 RGS4P49798 205 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 TIAL1Q01085 375 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 PMPCAQ10713 525 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 CSHL1Q14406 222 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 RBBP5Q15291 538 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 RBM20Q5T481 1227 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 TMEM211Q6ICI0 200 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 UGT3A1Q6NUS8 523 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 CCDC137Q6PK04 289 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 SPNS3Q6ZMD2 512 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 CTAGE6Q86UF2 777 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 LGI4Q8N135 537 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 EID3Q8N140 333 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 AGGF1Q8N302 714 aaeCLIP11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 OR10Q1Q8NGQ4 319 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 CALML6Q8TD86 181 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 UTP15Q8TED0 518 aaKnown RBP11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 RND1Q92730 232 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 LINGO1Q96FE5 620 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 TSNARE1Q96NA8 513 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 OR4K3Q96R72 315 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 ARL15Q9NXU5 204 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 KCMF1Q9P0J7 381 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 ZFATQ9P243 1243 aa11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 KLF13Q9Y2Y9 288 aaPredicted RBP11.17□□□□□ -0.62
TRAFD1-205ENST00000548277 CELSR1Q9NYQ6 3014 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 A0A0G2JN53 185 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 PABPN1LA6NDY0 278 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 SAGE2PA6NJ88 616 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 FAM166BA8MTA8 275 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 NPIPA2E9PIF3 369 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 NPIPA3F8WFD2 350 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 G3V3Y1 287 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 PSMD12O00232 456 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 MYO1DO94832 1006 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 MLNP12872 115 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 CDKN2DP55273 166 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 PLGLB1Q02325 96 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 RGS1Q08116 209 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 SNTB1Q13884 538 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 CMPK2Q5EBM0 449 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 CYP4Z2PQ8N1L4 340 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 AFAP1L2Q8N4X5 818 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 MCUQ8NE86 351 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 NFAM1Q8NET5 270 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 OR5M9Q8NGP3 310 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 SERPINB12Q96P63 405 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 NAP1L3Q99457 506 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 ZNF559Q9BR84 538 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 HAUS8Q9BT25 410 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 SGPP1Q9BX95 441 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 XAB2Q9HCS7 855 aaKnown RBP11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 KCNJ16Q9NPI9 418 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 NPDC1Q9NQX5 325 aaPredicted RBP11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 TAS2R13Q9NYV9 303 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 SLC17A6Q9P2U8 582 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 ERVK-11Q9UQG0 969 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 COMMD10Q9Y6G5 202 aa11.16□□□□□ -0.62
TRAFD1-205ENST00000548277 AKAP6Q13023 2319 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 SPG11Q96JI7 2443 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 TRBC2A0A5B9 178 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 PINLYPA6NC86 204 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 PGRMC1O00264 195 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 PRKNO60260 465 aaPredicted RBP11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 BANF1O75531 89 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 ITGA10O75578 1167 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 TOXO94900 526 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 RNH1P13489 461 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 SAT1P21673 171 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 CCND1P24385 295 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 PPP2R1BP30154 601 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 CLCN2P51788 898 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 NUP107P57740 925 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 BTN3A2P78410 334 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 DHX9Q08211 1270 aaKnown RBP11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 MYBPHQ13203 477 aa11.15□□□□□ -0.62
TRAFD1-205ENST00000548277 PWP1Q13610 501 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms