RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 GALNT16Q8N428 558 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 EPS8L3Q8TE67 593 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 AENQ8WTP8 325 aaKnown RBP17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 UBE2E3Q969T4 207 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 GAL3ST3Q96A11 431 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 MS4A6EQ96DS6 147 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 VPS50Q96JG6 964 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 NUDT9Q9BW91 350 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 VN1R1Q9GZP7 353 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 IPPKQ9H8X2 491 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 PPCSQ9HAB8 311 aa17.69■□□□□ 0.42
PRPF40B-206ENST00000547764 OR2W5A6NFC9 320 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 FOXO6A8MYZ6 492 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 ERI3O43414 337 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 IL10P22301 178 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 PIK3CGP48736 1102 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 PGDP52209 483 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 SOX8P57073 446 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 BTN3A2P78410 334 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 AIMP2Q13155 320 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 ADPRMQ3LIE5 342 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 MFSD4BQ5TF39 518 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 TMEM205Q6UW68 189 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 MYLK4Q86YV6 388 aaPredicted RBP17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 CYP4X1Q8N118 509 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 OR7G3Q8NG95 312 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 ZNF473Q8WTR7 871 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 RBCK1Q9BYM8 510 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 REXO4Q9GZR2 422 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 ACTR8Q9H981 624 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 CLK4Q9HAZ1 481 aaKnown RBP17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 GPR83Q9NYM4 423 aa17.68■□□□□ 0.42
PRPF40B-206ENST00000547764 NUP210LQ5VU65 1888 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 A0A0G2JN53 185 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 A8MT66 165 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 PCDH17O14917 1159 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 HPP00738 406 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 C8orf89P0DMQ9 161 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 PCNAP12004 261 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 COX6A1P12074 109 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 HPDP32754 393 aaPredicted RBP17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 PLA2G16P53816 162 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 EEF1A2Q05639 463 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 RASA2Q15283 850 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 LIPJQ5W064 366 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 EMBQ6PCB8 327 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 NDUFAF7Q7L592 441 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 OR2L5Q8NG80 312 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 TBC1D20Q96BZ9 403 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 FAR2Q96K12 515 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 OR1F2PQ96R84 312 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 F2RL3Q96RI0 385 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 PARD6BQ9BYG5 372 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 NOL11Q9H8H0 719 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 LANCL2Q9NS86 450 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 PCTPQ9UKL6 214 aa17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 G3BP2Q9UN86 482 aaKnown RBP17.67■□□□□ 0.42
PRPF40B-206ENST00000547764 TNRC6AQ8NDV7 1962 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 LOC102723996A0A087X1L8 192 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 A0A1W2PQ72 361 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 OR7A17O14581 309 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 UGDHO60701 494 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 CDC123O75794 336 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 FHP07954 510 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 GSTA1P08263 222 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 CYC1P08574 325 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 KRT15P19012 456 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 ITGA3P26006 1051 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 Q0VFX4 171 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 MYBPC3Q14896 1274 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 SH2D5Q6ZV89 423 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 PARP9Q8IXQ6 854 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 CA13Q8N1Q1 262 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 L3MBTL4Q8NA19 623 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 OR2W6PQ8NHA6 318 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 METTL21AQ8WXB1 218 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 CAVIN3Q969G5 261 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 NSUN5Q96P11 429 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 QRFPRQ96P65 431 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 SMAD5Q99717 465 aaKnown RBP17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 MS4A8Q9BY19 250 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 ZNF160Q9HCG1 818 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 ZBTB26Q9HCK0 441 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 PRM3Q9NNZ6 103 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 DCDC2Q9UHG0 476 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 RNF11Q9Y3C5 154 aa17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 HEMK1Q9Y5R4 338 aaPredicted RBP17.66■□□□□ 0.42
PRPF40B-206ENST00000547764 IGHV1-45A0A0A0MS14 117 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 NSG1A0A0A6YYJ2 146 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 CDH16O75309 829 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 RPS17P08708 135 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 NUDT17P0C025 328 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 TAC1P20366 129 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 SERPINB1P30740 379 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 RHAGQ02094 409 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 RUNX2Q13950 521 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 CPSF6Q16630 551 aaKnown RBP eCLIP17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 TRIM40Q6P9F5 258 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 ABHD17CQ6PCB6 329 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 LANCL3Q6ZV70 420 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms