RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 GALNT15Q8N3T1 639 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 MTFMTQ96DP5 389 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ZNF764Q96H86 408 aaPredicted RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 SMIM10Q96HG1 83 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 EBF4Q9BQW3 602 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 BRINP2Q9C0B6 783 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 KLHL25Q9H0H3 589 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 OR51B5Q9H339 312 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 WDR55Q9H6Y2 383 aaPredicted RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 COPS7BQ9H9Q2 264 aaPredicted RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 CDC14AQ9UNH5 594 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 PCDHB3Q9Y5E6 796 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 CCDC187A0A096LP49 1063 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 LOC105369274A0A096LPK9 316 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 LOC102723532A0A0G2JNH3 316 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ATP6AP2A0A1C7CYW4 349 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ARHGAP10A1A4S6 786 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 BLACEA4D250 179 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 SYNDIG1LA6NDD5 238 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 TMEM150CB9EJG8 249 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 H0YIG0 161 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 PLPP1O14494 284 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ERI3O43414 337 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 NRP2O60462 931 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ATP6AP2O75787 350 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 SERPIND1P05546 499 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 HIST1H1TP22492 207 aaPredicted RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 HNRNPH1P31943 449 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 MTTPP55157 894 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 C21orf58P58505 322 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 RPL38P63173 70 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 CYP4F2P78329 520 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 MC2RQ01718 297 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 DPY19L1Q2PZI1 675 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 TOR1AIP1Q5JTV8 583 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 FAM91A1Q658Y4 838 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 NXNQ6DKJ4 435 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 OR4C11Q6IEV9 310 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ADNP2Q6IQ32 1131 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 NOXRED1Q6NXP6 359 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 COMMD6Q7Z4G1 85 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 PPP1R3BQ86XI6 285 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 OR4N4Q8N0Y3 316 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ARHGEF39Q8N4T4 335 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 BMPERQ8N8U9 685 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 GLB1L3Q8NCI6 653 aaPredicted RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 PROKR1Q8TCW9 393 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 UTP15Q8TED0 518 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 OR52B2Q96RD2 323 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 SERINC2Q96SA4 455 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 HBEGFQ99075 208 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ASPSCR1Q9BZE9 553 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ANKHQ9HCJ1 492 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 AIG1Q9NVV5 245 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 LYARQ9NX58 379 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 MS4A12Q9NXJ0 267 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 ZIM2Q9NZV7 527 aa15.24■□□□□ 0.03
PRPF40A-212ENST00000545856 DYTNA2CJ06 578 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 HYKKA2RU49 373 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 A8MU76 341 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 PEX11AO75192 247 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 NSA2O95478 260 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 ETHE1O95571 254 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 FOLR1P15328 257 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 BSGP35613 385 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 SSR2P43308 183 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 NOVA1P51513 510 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 SIM1P81133 766 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 ZNF763Q0D2J5 394 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 SQLEQ14534 574 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 C16orf72Q14CZ0 275 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 GALNTL6Q49A17 601 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 RFTN2Q52LD8 501 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 PDCD4Q53EL6 469 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 SCIMPQ6UWF3 145 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 CEACAM20Q6UY09 585 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 CPSF7Q8N684 471 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 C1orf52Q8N6N3 182 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 ADAMTS14Q8WXS8 1223 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 MTERF3Q96E29 417 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 LRFN5Q96NI6 719 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 F2RL3Q96RI0 385 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 DPH2Q9BQC3 489 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 NDC1Q9BTX1 674 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 DDA1Q9BW61 102 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 ZNF717Q9BY31 904 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 MRPL1Q9BYD6 325 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 FAM117AQ9C073 453 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 LYRM4Q9HD34 91 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 SDR39U1Q9NRG7 319 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 PHF11Q9UIL8 331 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 PCDHGA3Q9Y5H0 932 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 PTGDR2Q9Y5Y4 395 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 SPACA6W5XKT8 324 aa15.23■□□□□ 0.03
PRPF40A-212ENST00000545856 PTPRBP23467 1997 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 P2RX6O15547 441 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 B3GALT2O43825 422 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 PCDH7O60245 1069 aa15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 CSO75390 466 aaKnown RBP15.22■□□□□ 0.03
PRPF40A-212ENST00000545856 EIF2S1P05198 315 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms