RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 MED22Q15528 200 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 ZFP69Q49AA0 526 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 ATP13A5Q4VNC0 1218 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 XKR6Q5GH73 641 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 MEDAGQ5VYS4 303 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 LRRC66Q68CR7 880 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 CRTC1Q6UUV9 634 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 ZNF517Q6ZMY9 492 aaPredicted RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 KIAA1549LQ6ZVL6 1849 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 SAPCD2Q86UD0 394 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 TSPAN33Q86UF1 283 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 RAB43Q86YS6 212 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 FAM217AQ8IXS0 508 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 NAGSQ8N159 534 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 NINQ8N4C6 2090 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 OXR1Q8N573 874 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 Q8N9G6 341 aaPredicted RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 SIMC1Q8NDZ2 872 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 OR52N2Q8NGI0 321 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 OR4A15Q8NGL6 344 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 CDC26Q8NHZ8 85 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 CLP1Q92989 425 aaKnown RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 MAL2Q969L2 176 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 SCRN2Q96FV2 425 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 MCCC1Q96RQ3 725 aaPredicted RBP8.41□□□□□ -1.06
TDP1-204ENST00000545686 RNF38Q9H0F5 515 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 MIR1-1HGQ9H1L0 117 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 ABCG8Q9H221 673 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 FZD3Q9NPG1 666 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 TAS2R9Q9NYW1 312 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 ATP6V1HQ9UI12 483 aa8.41□□□□□ -1.06
TDP1-204ENST00000545686 MGAT4DA6NG13 374 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 SMAD6O43541 496 aaKnown RBP8.4□□□□□ -1.06
TDP1-204ENST00000545686 PCDH7O60245 1069 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 DNTTP04053 509 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 ANXA4P09525 319 aaPredicted RBP8.4□□□□□ -1.06
TDP1-204ENST00000545686 MAGP20916 626 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 TIA1P31483 386 aaKnown RBP eCLIP8.4□□□□□ -1.06
TDP1-204ENST00000545686 TNFSF8P32971 234 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 RPL3P39023 403 aaKnown RBP8.4□□□□□ -1.06
TDP1-204ENST00000545686 SCARB2Q14108 478 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 PTGES3Q15185 160 aaKnown RBP8.4□□□□□ -1.06
TDP1-204ENST00000545686 SSX1Q16384 188 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 ZNF630Q2M218 657 aaPredicted RBP8.4□□□□□ -1.06
TDP1-204ENST00000545686 BCL7AQ4VC05 210 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 CRB2Q5IJ48 1285 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 RNLSQ5VYX0 342 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 PRSS55Q6UWB4 352 aaPredicted RBP8.4□□□□□ -1.06
TDP1-204ENST00000545686 SPATC1Q76KD6 591 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 NANOGNBQ7Z5D8 188 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 VN1R5Q7Z5H4 357 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 THOC6Q86W42 341 aaKnown RBP8.4□□□□□ -1.06
TDP1-204ENST00000545686 ASCC1Q8N9N2 400 aaKnown RBP8.4□□□□□ -1.06
TDP1-204ENST00000545686 WFDC5Q8TCV5 224 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 UPF1Q92900 1129 aaKnown RBP eCLIP8.4□□□□□ -1.06
TDP1-204ENST00000545686 ECHDC3Q96DC8 303 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 ASIC4Q96FT7 647 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 CASD1Q96PB1 797 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 FAM129BQ96TA1 746 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 PRDM8Q9NQV8 689 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 ACER3Q9NUN7 267 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 SEC14L4Q9UDX3 406 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 V9GYH0 126 aa8.4□□□□□ -1.06
TDP1-204ENST00000545686 DSPPQ9NZW4 1301 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 IQCMA0A1B0GVH7 501 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 GPX5O75715 221 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 ATP1B2P14415 290 aaPredicted RBP8.4□□□□□ -1.07
TDP1-204ENST00000545686 RHCEP18577 417 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 CRISP3P54108 245 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 SNRPGP62308 76 aaKnown RBP8.4□□□□□ -1.07
TDP1-204ENST00000545686 CYP4F2P78329 520 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 EEF1A2Q05639 463 aaKnown RBP8.4□□□□□ -1.07
TDP1-204ENST00000545686 DOC2AQ14183 400 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 E2F2Q14209 437 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 CDK10Q15131 360 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 TMEM201Q5SNT2 666 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 TRIM40Q6P9F5 258 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 VRK3Q8IV63 474 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 BBS7Q8IWZ6 715 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 RNF175Q8N4F7 328 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 FAM181AQ8N9Y4 354 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 IL17RCQ8NAC3 791 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 FAM46DQ8NEK8 389 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 OR2AP1Q8NGE2 309 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 OR9Q2Q8NGE9 314 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 WDR36Q8NI36 951 aaKnown RBP8.4□□□□□ -1.07
TDP1-204ENST00000545686 RASSF5Q8WWW0 418 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 OPALINQ96PE5 141 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 OR5M11Q96RB7 305 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 MTERF1Q99551 399 aaKnown RBP8.4□□□□□ -1.07
TDP1-204ENST00000545686 TSEN34Q9BSV6 310 aaKnown RBP8.4□□□□□ -1.07
TDP1-204ENST00000545686 NDEL1Q9GZM8 345 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 SLC25A19Q9HC21 320 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 NDOR1Q9UHB4 597 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 LSM2Q9Y333 95 aaKnown RBP8.4□□□□□ -1.07
TDP1-204ENST00000545686 BACE2Q9Y5Z0 518 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 ENPP4Q9Y6X5 453 aa8.4□□□□□ -1.07
TDP1-204ENST00000545686 C2orf78A6NCI8 922 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 HMX3A6NHT5 357 aa8.39□□□□□ -1.07
TDP1-204ENST00000545686 CENPXA8MT69 81 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms