RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ARID1BQ8NFD5 2236 aaPredicted RBP13.13□□□□□ -0.31
SCARB1-209ENST00000545305 RALGAPA1Q6GYQ0 2036 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 IGHV5-51A0A0C4DH38 117 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 A0A0G2JN53 185 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 LOC102723532A0A0G2JNH3 316 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 RTCAO00442 366 aaKnown RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 AIM2O14862 343 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 P2RX6O15547 441 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 AKAP10O43572 662 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 SRPX2O60687 465 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 LRP3O75074 770 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 GUCY1B2O75343 617 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 EEDO75530 441 aaKnown RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 LRATO95237 230 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 CPNE6O95741 557 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 GBAP04062 536 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 IL6P05231 212 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 KRT16P08779 473 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 ZNF888P0CJ79 500 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 COX7A2P14406 83 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 CKMT2P17540 419 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 DDX5P17844 614 aaKnown RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 CAPN3P20807 821 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 TPP2P29144 1249 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 IL12AP29459 219 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 C21orf58P58505 322 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 CCL7P80098 99 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 HSD11B2P80365 405 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 SPEM2Q0P670 501 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 HYAL2Q12891 473 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 SLC14A1Q13336 389 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 SQSTM1Q13501 440 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 CLPPQ16740 277 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 DEFB110Q30KQ9 67 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 VPS26BQ4G0F5 336 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 DNAL1Q4LDG9 190 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 COQ5Q5HYK3 327 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 TMTC4Q5T4D3 741 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 TMEM71Q6P5X7 295 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 ABHD17CQ6PCB6 329 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 C16orf89Q6UX73 402 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 RINLQ6ZS11 566 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 R3HCC1LQ7Z5L2 792 aaKnown RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 UBE3DQ7Z6J8 389 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 TMEM132CQ8N3T6 1108 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 DNAJC22Q8N4W6 341 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 KRTCAP2Q8N6L1 136 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 ZCCHC10Q8TBK6 192 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 RHBDD1Q8TEB9 315 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 C16orf78Q8WTQ4 265 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 TESCQ96BS2 214 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 SLC45A3Q96JT2 553 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 PRPF18Q99633 342 aaKnown RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 BTBD10Q9BSF8 475 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 SORBS1Q9BX66 1292 aaKnown RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 LRRN3Q9H3W5 708 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 KLHL31Q9H511 634 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 SYNPO2LQ9H987 977 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 FAM60AQ9NP50 221 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 TMEM9BQ9NQ34 198 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 IRAK4Q9NWZ3 460 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 LEF1Q9UJU2 399 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 PLCL2Q9UPR0 1127 aa13.12□□□□□ -0.31
SCARB1-209ENST00000545305 MDC1Q14676 2089 aaKnown RBP13.12□□□□□ -0.31
SCARB1-209ENST00000545305 A0A1W2PP18 115 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 SCAMP2O15127 329 aaKnown RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 TOX3O15405 576 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 HIST1H1TP22492 207 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 S100A3P33764 101 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 SEPHS1P49903 392 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 TAS2R50P59544 299 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 RAB8AP61006 207 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 TRA2BP62995 288 aaKnown RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 CFHR1Q03591 330 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 SRSF11Q05519 484 aaKnown RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 DMTNQ08495 405 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 PGS1Q32NB8 556 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 FAM174BQ3ZCQ3 159 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 ARHGAP24Q8N264 748 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 KCT2Q8NC54 265 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 UTP15Q8TED0 518 aaKnown RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 SLC7A6OSQ96CW6 309 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 EGLN2Q96KS0 407 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 GFM1Q96RP9 751 aaKnown RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 NPAS2Q99743 824 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 NUDT22Q9BRQ3 303 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 ZNF717Q9BY31 904 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 AICDAQ9GZX7 198 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 C1orf21Q9H246 121 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 SEMA4GQ9NTN9 838 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 ATAD3AQ9NVI7 634 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 GID8Q9NWU2 228 aa13.11□□□□□ -0.31
SCARB1-209ENST00000545305 LYARQ9NX58 379 aaKnown RBP13.11□□□□□ -0.31
SCARB1-209ENST00000545305 TMEM9Q9P0T7 183 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms