RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 EFHD2Q96C19 240 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 LRIG1Q96JA1 1093 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 KCNS3Q9BQ31 491 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CNPPD1Q9BV87 410 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 SLC22A4Q9H015 551 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 RHBGQ9H310 441 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 BRF2Q9HAW0 419 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TLR9Q9NR96 1032 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 FKBP14Q9NWM8 211 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 ELOVL2Q9NXB9 296 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 IL37Q9NZH6 218 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 STOX2Q9P2F5 926 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 KLHL42Q9P2K6 505 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 P2RX2Q9UBL9 471 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 SLC27A6Q9Y2P4 619 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 E7EQ34 232 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CCRL2O00421 344 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 GPR39O43194 453 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 MMP20O60882 483 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 HRH2P25021 359 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 NOS3P29474 1203 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 XKP51811 444 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 KEAP1Q14145 624 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 DOC2AQ14183 400 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 MRPL58Q14197 206 aaKnown RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 SNAPC1Q16533 368 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 GGTA1PQ4G0N0 100 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 LY6G5CQ5SRR4 150 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 LRRTM4Q86VH4 590 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 FAM129CQ86XR2 697 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 CHPFQ8IZ52 775 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 SCAMP4Q969E2 229 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 OTUB2Q96DC9 234 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 C12orf66Q96MD2 445 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 PKP4Q99569 1192 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 DPH2Q9BQC3 489 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 P2RY12Q9H244 342 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TNFRSF12AQ9NP84 129 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 EQTNQ9NQ60 294 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 VAPAQ9P0L0 249 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 SLAMF8Q9P0V8 285 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 TAC3Q9UHF0 121 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 FBXO9Q9UK97 447 aaPredicted RBP5.58□□□□□ -1.52
VPS50-220ENST00000544910 FBXW2Q9UKT8 454 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 LYVE1Q9Y5Y7 322 aa5.58□□□□□ -1.52
VPS50-220ENST00000544910 FAM172BPA6NC97 362 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ARHGEF33A8MVX0 844 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 APOL3O95236 402 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 C1SP09871 688 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ZNF182P17025 639 aaPredicted RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 TNNI3P19429 210 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CD247P20963 164 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PSMA1P25786 263 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 SLC9A3P48764 834 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CRISP3P54108 245 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 TBPL1P62380 186 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PTSQ03393 145 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SF1Q15637 639 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 C9orf64Q5T6V5 341 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ALG1LQ6GMV1 187 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 TMPRSS11AQ6ZMR5 421 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 Q6ZVL8 140 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CHST15Q7LFX5 561 aaPredicted RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 SERPINA11Q86U17 422 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CENPSQ8N2Z9 138 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 AQP11Q8NBQ7 271 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 HAVCR1Q96D42 359 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 MND1Q9BWT6 205 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 OR51B5Q9H339 312 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 MAN2B2Q9Y2E5 1009 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 RPL36Q9Y3U8 105 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 INSL6Q9Y581 213 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 IRAK3Q9Y616 596 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ARPC4-TTLL3A0A0A6YYG9 625 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 TAPBPO15533 448 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CHST10O43529 356 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 KLK8O60259 260 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 POP7O75817 140 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 PEX11BO96011 259 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 C1GALT1C1LP0DN25 315 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CAPZA2P47755 286 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 STXBP1P61764 594 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 SLC7A9P82251 487 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 TARDBPQ13148 414 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS50-220ENST00000544910 EXOC3L2Q2M3D2 409 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 GPR149Q86SP6 731 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PEG10Q86TG7 708 aaKnown RBP5.57□□□□□ -1.52
VPS50-220ENST00000544910 SLC39A11Q8N1S5 342 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 ZNF366Q8N895 744 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PIGXQ8TBF5 258 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SLCO4A1Q96BD0 722 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SLC7A5P2Q9GIP4 190 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 NEUROD4Q9HD90 331 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CALML5Q9NZT1 146 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 SH3PXD2BA1X283 911 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 CENPBD1B2RD01 187 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 XPNPEP2O43895 674 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 INMTO95050 263 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 GBAP04062 536 aa5.57□□□□□ -1.52
VPS50-220ENST00000544910 PTPRRQ15256 657 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms