RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TATDN1Q6P1N9 297 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 CTR9Q6PD62 1173 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 PHLDB2Q86SQ0 1253 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 ANKRD46Q86W74 232 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 SIAH3Q8IW03 269 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 SERPINA12Q8IW75 414 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 MAB21L3Q8N8X9 362 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 CLEC1AQ8NC01 280 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 DMBX1Q8NFW5 382 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 CCDC47Q96A33 483 aaKnown RBP3.37□□□□□ -1.87
SCFD1-207ENST00000544052 C5orf30Q96GV9 206 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 ZNF354BQ96LW1 612 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 DUX5Q96PT3 197 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 MAP3K3Q99759 626 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 TRIM7Q9C029 511 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 ZFP57Q9NU63 452 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 DNAJC11Q9NVH1 559 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 SPG21Q9NZD8 308 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 MOSPD1Q9UJG1 213 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 CHKBQ9Y259 395 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 R4GN57 208 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 PLEKHG2Q9H7P9 1386 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 LAMB4A4D0S4 1761 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 KDM3BQ7LBC6 1761 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 CLSPNQ9HAW4 1339 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 TNRC6CQ9HCJ0 1690 aaKnown RBP3.37□□□□□ -1.87
SCFD1-207ENST00000544052 FPGTO14772 594 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 HTATSF1O43719 755 aaKnown RBP3.37□□□□□ -1.87
SCFD1-207ENST00000544052 PRKNO60260 465 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-207ENST00000544052 ACSL4O60488 711 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 BCAS2O75934 225 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-207ENST00000544052 SNHG28P0DPA3 235 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 C1QTNF8P60827 252 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 GPR33Q49SQ1 333 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 IFI44LQ53G44 452 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 TTC27Q6P3X3 843 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 SIGLEC15Q6ZMC9 328 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 C9orf139Q6ZV77 190 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 TDHQ8IZJ6 230 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 FCAMRQ8WWV6 532 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 FAM46BQ96A09 425 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 SCRN2Q96FV2 425 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 CDKN2AIPNLQ96HQ2 116 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 EPSTI1Q96J88 318 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 TRMT61BQ9BVS5 477 aaKnown RBP3.37□□□□□ -1.87
SCFD1-207ENST00000544052 AKIRIN1Q9H9L7 192 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-207ENST00000544052 ECHDC1Q9NTX5 307 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 CYP39A1Q9NYL5 469 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 ACAD8Q9UKU7 415 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 SLX4Q8IY92 1834 aa3.37□□□□□ -1.87
SCFD1-207ENST00000544052 CARMIL3Q8ND23 1372 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 NUP98P52948 1817 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 TRAV18A0A075B6X5 111 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 C13orf42A0A1B0GVH6 325 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 BICDL2A1A5D9 508 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 ILVBLA1L0T0 632 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 TMEM150CB9EJG8 249 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 E5RGE8 158 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 ZNF197O14709 1029 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 INSIG1O15503 277 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 CIDEAO60543 219 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 APOHP02749 345 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 ATP1A1P05023 1023 aaKnown RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 IGHV4-38-2P0DP08 117 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 LIFP15018 202 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 DCTP40126 519 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 IER3P46695 156 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 PRELPP51888 382 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 SMSP52788 366 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 BPIFB3P59826 476 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 AKAP17AQ02040 695 aaKnown RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 SLC35D3Q5M8T2 416 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 LRRC38Q5VT99 294 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 PM20D1Q6GTS8 502 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 ZNF770Q6IQ21 691 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 SPSB3Q6PJ21 355 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 ASPGQ86U10 573 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 NFE4Q86UQ8 179 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 EXOC3L1Q86VI1 746 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 SAMD14Q8IZD0 417 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 NEK11Q8NG66 645 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 SLC26A7Q8TE54 656 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 TMEM143Q96AN5 459 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 SENP5Q96HI0 755 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 RBM41Q96IZ5 413 aaKnown RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 THOC3Q96J01 351 aaKnown RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 SPATA13Q96N96 652 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 MRPL17Q9NRX2 175 aaKnown RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 DONSONQ9NYP3 566 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-207ENST00000544052 APPL1Q9UKG1 709 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 NSG2Q9Y328 171 aa3.36□□□□□ -1.87
SCFD1-207ENST00000544052 PGRMC2O15173 223 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 ALDH4A1P30038 563 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 NT5C2P49902 561 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 SLC12A3P55017 1021 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 FKBP1BP68106 108 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 KCTD11Q693B1 232 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 OR4C11Q6IEV9 310 aa3.35□□□□□ -1.87
SCFD1-207ENST00000544052 FUT10Q6P4F1 479 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms