RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ABRAXAS2Q15018 415 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TGIF1Q15583 401 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 NKAIN1Q4KMZ8 207 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TMEM35AQ53FP2 167 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DEPDC1Q5TB30 811 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ARHGAP40Q5TG30 622 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 NIPAL1Q6NVV3 410 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SCIMPQ6UWF3 145 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DTX1Q86Y01 620 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CLYBLQ8N0X4 340 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SRFBP1Q8NEF9 429 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 LRRC8CQ8TDW0 803 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 NKD1Q969G9 470 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KCNC2Q96PR1 638 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SERPINI1Q99574 410 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 C17orf62Q9BQA9 187 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 AICDAQ9GZX7 198 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ILKAPQ9H0C8 392 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CHST8Q9H2A9 424 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 AKIRIN1Q9H9L7 192 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 COPS7BQ9H9Q2 264 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 BRF2Q9HAW0 419 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 IFT80Q9P2H3 777 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 GPN3Q9UHW5 284 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZDHHC2Q9UIJ5 367 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 A0A088AWK7 358 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF860A6NHJ4 632 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TMEM233B4DJY2 109 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 C9J4A7 227 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 H0YIG0 161 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TLX3O43711 291 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KLHL18O94889 574 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 NSA2O95478 260 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ETHE1O95571 254 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 B3GALT4O96024 378 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FGF4P08620 206 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HSD3B1P14060 373 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TCN2P20062 427 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF10P21506 573 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HSD3B2P26439 372 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FOXK2Q01167 660 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF33BQ06732 778 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CSTF3Q12996 717 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CUL3Q13618 768 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ADPRMQ3LIE5 342 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MLIPQ5VWP3 458 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KANK2Q63ZY3 851 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF385CQ66K41 422 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 LCN10Q6JVE6 187 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ATG14Q6ZNE5 492 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PDSS2Q86YH6 399 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 HOMEZQ8IX15 550 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF781Q8N8C0 355 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SNIP1Q8TAD8 396 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KCNE4Q8WWG9 221 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ZNF75CPQ92670 426 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RGMAQ96B86 450 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SORT1Q99523 831 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 THAP1Q9NVV9 213 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 NMRK1Q9NWW6 199 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PSD3Q9NYI0 1048 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 PPT2Q9UMR5 302 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RAP2CQ9Y3L5 183 aa13.74□□□□□ -0.21
TNFRSF1A-216ENST00000543995 C4orf51C9J302 202 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 GALR3O60755 368 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RDH16O75452 317 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SMIM10L1P0DMW3 83 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ITGAXP20702 1163 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DLSTP36957 453 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 STAT5AP42229 794 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 IMPG1Q17R60 797 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 AP5B1Q2VPB7 878 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 OR4C11Q6IEV9 310 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ABHD17CQ6PCB6 329 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DDIASQ8IXT1 998 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 AFAP1L2Q8N4X5 818 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 GBP7Q8N8V2 638 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 FAM76AQ8TAV0 307 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CT55Q8WUE5 264 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 TWIST2Q8WVJ9 160 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KIAA1143Q96AT1 154 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SMIM10Q96HG1 83 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 ROGDIQ9GZN7 287 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 AHSPQ9NZD4 102 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CROTQ9UKG9 612 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 DNAJC15Q9Y5T4 150 aa13.73□□□□□ -0.21
TNFRSF1A-216ENST00000543995 CACNA1AO00555 2505 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 LOC101059948A0A1B0GTJ6 334 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RTCAO00442 366 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KLF11O14901 512 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 KLK10O43240 276 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SNNO75324 88 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SKAP2O75563 359 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 SSR2P43308 183 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 RPL14P50914 215 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 MTTPP55157 894 aa13.72□□□□□ -0.21
TNFRSF1A-216ENST00000543995 OLR1P78380 273 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms