RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 HERC3Q15034 1050 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 NKG7Q16617 165 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 SHISA6Q6ZSJ9 500 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 GPRIN3Q6ZVF9 776 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 HDXQ7Z353 690 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 OR5T3Q8NGG3 340 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 SNRNP27Q8WVK2 155 aaKnown RBP14.3□□□□□ -0.12
CD9-210ENST00000543916 F2RL3Q96RI0 385 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 SPSB2Q99619 263 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 GATA5Q9BWX5 397 aaPredicted RBP14.3□□□□□ -0.12
CD9-210ENST00000543916 FAM117AQ9C073 453 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 PRORYQ9H606 182 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 WDR54Q9H977 334 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 DMRT3Q9NQL9 472 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 HCN3Q9P1Z3 774 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 TRPC4Q9UBN4 977 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 PTRH2Q9Y3E5 179 aaKnown RBP14.3□□□□□ -0.12
CD9-210ENST00000543916 MAP4K5Q9Y4K4 846 aa14.3□□□□□ -0.12
CD9-210ENST00000543916 PKD1L2Q7Z442 2459 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 IGLV3-12A0A075B6K2 115 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 URADA6NGE7 173 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 VSTM2BA6NLU5 285 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 MAGEB17A8MXT2 336 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 ERI3O43414 337 aaKnown RBP14.29□□□□□ -0.12
CD9-210ENST00000543916 TRIM13O60858 407 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 UMODP07911 640 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 PIK3CBP42338 1070 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 NEK2P51955 445 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 PLA2G16P53816 162 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 MAGOHP61326 146 aaKnown RBP14.29□□□□□ -0.12
CD9-210ENST00000543916 RPS13P62277 151 aaKnown RBP14.29□□□□□ -0.12
CD9-210ENST00000543916 OLR1P78380 273 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 CDC20Q12834 499 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 ERV3-1Q14264 604 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 VWA2Q5GFL6 755 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 FRG2Q64ET8 278 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 UBE3DQ7Z6J8 389 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 CDYL2Q8N8U2 506 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 ZSCAN1Q8NBB4 408 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 OR2L5Q8NG80 312 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 OR2Y1Q8NGV0 311 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 STT3BQ8TCJ2 826 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 AGAP11Q8TF27 550 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 ARL8AQ96BM9 186 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 REPS1Q96D71 796 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 MTFMTQ96DP5 389 aaKnown RBP14.29□□□□□ -0.12
CD9-210ENST00000543916 PKNOX2Q96KN3 472 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 QRFPRQ96P65 431 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 FRG2BQ96QU4 278 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 YIPF2Q9BWQ6 316 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 REXO4Q9GZR2 422 aaKnown RBP14.29□□□□□ -0.12
CD9-210ENST00000543916 OR51B5Q9H339 312 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 SOX17Q9H6I2 414 aaPredicted RBP14.29□□□□□ -0.12
CD9-210ENST00000543916 KCNK9Q9NPC2 374 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 FARSBQ9NSD9 589 aaKnown RBP14.29□□□□□ -0.12
CD9-210ENST00000543916 ZNF282Q9UDV7 671 aaPredicted RBP14.29□□□□□ -0.12
CD9-210ENST00000543916 ADGRE2Q9UHX3 823 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 STK38LQ9Y2H1 464 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 NBEAQ8NFP9 2946 aa14.29□□□□□ -0.12
CD9-210ENST00000543916 UQCRHLA0A096LP55 91 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 SAP18O00422 153 aaKnown RBP14.28□□□□□ -0.12
CD9-210ENST00000543916 TM9SF1O15321 606 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 SASH3O75995 380 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 ETHE1O95571 254 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 BPGMP07738 259 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 UQCRHP07919 91 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 CD63P08962 238 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 ZGLP1P0C6A0 271 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 FOLR3P41439 243 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 PKNOX1P55347 436 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 BTN3A2P78410 334 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 UGT8Q16880 541 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 CFAP157Q5JU67 520 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 TCHHL1Q5QJ38 904 aaPredicted RBP14.28□□□□□ -0.12
CD9-210ENST00000543916 AGBL2Q5U5Z8 902 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 KHDRBS2Q5VWX1 349 aaKnown RBP14.28□□□□□ -0.12
CD9-210ENST00000543916 TTC19Q6DKK2 380 aaPredicted RBP14.28□□□□□ -0.12
CD9-210ENST00000543916 TRIM40Q6P9F5 258 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 ABHD17CQ6PCB6 329 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 ZC3H7AQ8IWR0 971 aaKnown RBP14.28□□□□□ -0.12
CD9-210ENST00000543916 PRSS58Q8IYP2 241 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 OR51Q1Q8NH59 317 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 ADAMTS17Q8TE56 1095 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 CMTM7Q96FZ5 175 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 MAGEB10Q96LZ2 347 aaPredicted RBP14.28□□□□□ -0.12
CD9-210ENST00000543916 KCNA7Q96RP8 456 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 VIPAS39Q9H9C1 493 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 PRM3Q9NNZ6 103 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 TNFRSF12AQ9NP84 129 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 MID1IP1Q9NPA3 183 aa14.28□□□□□ -0.12
CD9-210ENST00000543916 MKKSQ9NPJ1 570 aaPredicted RBP14.28□□□□□ -0.12
CD9-210ENST00000543916 NXT1Q9UKK6 140 aaKnown RBP14.28□□□□□ -0.12
CD9-210ENST00000543916 CDC14CA4D256 554 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 FOXE1O00358 373 aaPredicted RBP14.27□□□□□ -0.13
CD9-210ENST00000543916 RTCAO00442 366 aaKnown RBP14.27□□□□□ -0.13
CD9-210ENST00000543916 JRKO75564 520 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 ZWINTO95229 277 aa14.27□□□□□ -0.13
CD9-210ENST00000543916 ESRRBO95718 433 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms