RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 FAM174AQ8TBP5 190 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 FAHD2AQ96GK7 314 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 FAM129BQ96TA1 746 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 RNF2Q99496 336 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 TPPP3Q9BW30 176 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ZNF556Q9HAH1 456 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 C6orf50Q9HD87 102 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CDH7Q9ULB5 785 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 A0A0A6YYH2 397 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 A6NJ64 397 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 PP2D1A8MPX8 630 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 LRRTM2O43300 516 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 RAD1O60671 282 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 SLC35G4P0C7Q5 338 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ARAFP10398 606 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 NNMTP40261 264 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 SUOXP51687 545 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CDH17Q12864 832 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CLEC16AQ2KHT3 1053 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 COL13A1Q5TAT6 717 aaPredicted RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 MPZL3Q6UWV2 235 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 USP45Q70EL2 814 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CDK20Q8IZL9 346 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 OR1M1Q8NGA1 313 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ALG3Q92685 438 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 PIGQQ9BRB3 760 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 HDHD2Q9H0R4 259 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ANKRD19PQ9H560 264 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 GAREM1Q9H706 876 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 PRDM7Q9NQW5 492 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 RAB6BQ9NRW1 208 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 BABAM2Q9NXR7 383 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 MOKQ9UQ07 419 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 PRG3Q9Y2Y8 225 aaPredicted RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 NEU2Q9Y3R4 380 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 MAST2Q6P0Q8 1798 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 HACD1B0YJ81 288 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 RASAL1O95294 804 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 MMP10P09238 476 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CYP19A1P11511 503 aaPredicted RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 PCMT1P22061 227 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 APEX1P27695 318 aaKnown RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ALDH3B1P43353 468 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CDH4P55283 916 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ZYXQ15942 572 aaKnown RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 OGFRL1Q5TC84 451 aaPredicted RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 BICRALQ6AI39 1079 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 SLC39A4Q6P5W5 647 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 DPP8Q6V1X1 898 aaPredicted RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 ZBTB49Q6ZSB9 765 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 TMPRSS7Q7RTY8 843 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 GPR150Q8NGU9 434 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 OR5J2Q8NH18 312 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 PCDH19Q8TAB3 1148 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 HASPINQ8TF76 798 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CORO2AQ92828 525 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CCDC124Q96CT7 223 aaKnown RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 SSU72Q9NP77 194 aaKnown RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 MRPS30Q9NP92 439 aaKnown RBP8.59□□□□□ -1.03
VPS13D-212ENST00000543766 BTNL2Q9UIR0 455 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 CNTNAP5Q8WYK1 1306 aa8.59□□□□□ -1.03
VPS13D-212ENST00000543766 TSTD3H0UI37 97 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 CYR61O00622 381 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ADORA1P30542 326 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 RBP2P50120 134 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 FGF8P55075 233 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 CDH15P55291 814 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 NKX3-2P78367 333 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 MOGAT2Q3SYC2 334 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 RFTN2Q52LD8 501 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 TSTD2Q5T7W7 516 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 VTCN1Q7Z7D3 282 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 NOXA1Q86UR1 476 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 VASH2Q86V25 355 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 IFNEQ86WN2 208 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 DCUN1D3Q8IWE4 304 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ADGRF2Q8IZF7 708 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 OR52E1Q8NGJ3 308 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 GLT1D1Q96MS3 346 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 IL12RB2Q99665 862 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 NXF3Q9H4D5 531 aaKnown RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 NUDT5Q9UKK9 219 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 KIAA1024Q9UPX6 916 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 RBBP6Q7Z6E9 1792 aaKnown RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ITGB1BP1O14713 200 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 AVILO75366 819 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 CBX7O95931 251 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ABHD2P08910 425 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 NPSP0C0P6 89 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 CYP2D6P10635 497 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 PVALBP20472 110 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 PLA2G16P53816 162 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 SLC10A6Q3KNW5 377 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 IFI44LQ53G44 452 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 PAQR3Q6TCH7 311 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 WDR88Q6ZMY6 472 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 QSOX2Q6ZRP7 698 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 SMIM5Q71RC9 77 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 CHMP1BQ7LBR1 199 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 PCDH20Q8N6Y1 951 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms