RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 PROCP04070 461 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 MYL2P10916 166 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 JAK1P23458 1154 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 OTX2P32243 289 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 POLE2P56282 527 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 LINC00303Q3SY05 128 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 ZNF678Q5SXM1 525 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 LRIG3Q6UXM1 1119 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 CHSY3Q70JA7 882 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 PRSS41Q7RTY9 318 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 VN1R5Q7Z5H4 357 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 PPP1R32Q7Z5V6 425 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 MYLK4Q86YV6 388 aaPredicted RBP16.92■□□□□ 0.3
TSFM-208ENST00000543727 ZC3H7AQ8IWR0 971 aaKnown RBP16.92■□□□□ 0.3
TSFM-208ENST00000543727 HOMEZQ8IX15 550 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 IQCKQ8N0W5 287 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 PPP4R1Q8TF05 950 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 KCNC2Q96PR1 638 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 YIPF2Q9BWQ6 316 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 SOX17Q9H6I2 414 aaPredicted RBP16.92■□□□□ 0.3
TSFM-208ENST00000543727 C3orf18Q9UK00 162 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 EMCNQ9ULC0 261 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 ATMQ13315 3056 aa16.92■□□□□ 0.3
TSFM-208ENST00000543727 IDSB3KWA1 339 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 FOXE1O00358 373 aaPredicted RBP16.91■□□□□ 0.3
TSFM-208ENST00000543727 ERI3O43414 337 aaKnown RBP16.91■□□□□ 0.3
TSFM-208ENST00000543727 RDH16O75452 317 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 PCNAP12004 261 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 HNRNPH1P31943 449 aaKnown RBP16.91■□□□□ 0.3
TSFM-208ENST00000543727 ARL1P40616 181 aaPredicted RBP16.91■□□□□ 0.3
TSFM-208ENST00000543727 XCR1P46094 333 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 DNAJB13P59910 316 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 CLCQ05315 142 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 ZNF844Q08AG5 666 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 TRAF3Q13114 568 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 RCN2Q14257 317 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 RBBP7Q16576 425 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 KRT71Q3SY84 523 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 VWA2Q5GFL6 755 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 SRRM1Q8IYB3 904 aaKnown RBP16.91■□□□□ 0.3
TSFM-208ENST00000543727 C4orf33Q8N1A6 199 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 OR52B6Q8NGF0 335 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 TMEM237Q96Q45 408 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 SERINC2Q96SA4 455 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 SMC6Q96SB8 1091 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 ZNF382Q96SR6 550 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 TBCDQ9BTW9 1192 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 ING2Q9H160 280 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 ZBTB26Q9HCK0 441 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 ACSS2Q9NR19 701 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 TRPS1Q9UHF7 1281 aa16.91■□□□□ 0.3
TSFM-208ENST00000543727 G3BP2Q9UN86 482 aaKnown RBP16.91■□□□□ 0.3
TSFM-208ENST00000543727 MKRN2OSH3BPM6 223 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 RGS16O15492 202 aaPredicted RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 B3GALT2O43825 422 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 SUPT7LO94864 414 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 SCELO95171 688 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 TBX6O95947 436 aaPredicted RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 HEXBP07686 556 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 RNH1P13489 461 aaKnown RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 PTX3P26022 381 aaPredicted RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 EMP2P54851 167 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 MTTPP55157 894 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 RAB8AP61006 207 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 MAT1AQ00266 395 aaKnown RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 ASPHQ12797 758 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 ATP1A4Q13733 1029 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 CPSF6Q16630 551 aaKnown RBP eCLIP16.9■□□□□ 0.3
TSFM-208ENST00000543727 KHDRBS2Q5VWX1 349 aaKnown RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 ABHD17CQ6PCB6 329 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 PCSK4Q6UW60 755 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 MILR1Q7Z6M3 343 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 BANPQ8N9N5 519 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 CLEC1AQ8NC01 280 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 HUS1BQ8NHY5 278 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 TBC1D20Q96BZ9 403 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 KLHL31Q9H511 634 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 COPS7BQ9H9Q2 264 aaPredicted RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 SEMA4BQ9NPR2 832 aaPredicted RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 DMRT3Q9NQL9 472 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 P4HTMQ9NXG6 502 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 HCN3Q9P1Z3 774 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 C19orf25Q9UFG5 118 aaPredicted RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 PLLPQ9Y342 182 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 PCDHGA9Q9Y5G4 932 aaKnown RBP16.9■□□□□ 0.3
TSFM-208ENST00000543727 HS3ST3B1Q9Y662 390 aa16.9■□□□□ 0.3
TSFM-208ENST00000543727 MED13Q9UHV7 2174 aa16.89■□□□□ 0.3
TSFM-208ENST00000543727 PCSK5Q92824 1860 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 ZFYVE26Q68DK2 2539 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 LOC102723996A0A087X1L8 192 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 G3V2L1 256 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 SOCS6O14544 535 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 FHP07954 510 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 ACPPP15309 386 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 PKNOX1P55347 436 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 SOX8P57073 446 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 AP2B1P63010 937 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 SNRPNP63162 240 aaKnown RBP16.89■□□□□ 0.29
TSFM-208ENST00000543727 ZNF33BQ06732 778 aa16.89■□□□□ 0.29
TSFM-208ENST00000543727 LCP2Q13094 533 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms