RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ZNF101Q8IZC7 436 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 PSD4Q8NDX1 1056 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 TIGARQ9NQ88 270 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 GNG8Q9UK08 70 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 A0A0J9YVX5 310 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 EDDM13A0A1B0GTR0 161 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 PIRO00625 290 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 CNTN5O94779 1100 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 ZNF8P17098 575 aaPredicted RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 MAGEA12P43365 314 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 AGTR2P50052 363 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 PSMA6P60900 246 aaKnown RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 GPR17Q13304 367 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 OGFRL1Q5TC84 451 aaPredicted RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 GID4Q8IVV7 300 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 DCUN1D3Q8IWE4 304 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 JAGN1Q8N5M9 183 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 SNIP1Q8TAD8 396 aaKnown RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 SHKBP1Q8TBC3 707 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 SLC7A6OSQ96CW6 309 aaPredicted RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 RNF38Q9H0F5 515 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 TREM1Q9NP99 234 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 FLRT2O43155 660 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 HCRTO43612 131 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 DGKEP52429 567 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 GABARAPL2P60520 117 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 TMEM236Q5W0B7 351 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 NOXRED1Q6NXP6 359 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 C22orf39Q6P5X5 142 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 ZSWIM9Q86XI8 627 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 RANBP9Q96S59 729 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 ABI3Q9P2A4 366 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 MAB21L2Q9Y586 359 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 CEACAM7Q14002 265 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 TRAM1Q15629 374 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 CDHR3Q6ZTQ4 885 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 ZFAND4Q86XD8 727 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 CD99L2Q8TCZ2 262 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 DOHHQ9BU89 302 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 RETREG1Q9H6L5 497 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 PNO1Q9NRX1 252 aaKnown RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 AIG1Q9NVV5 245 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 PAK1IP1Q9NWT1 392 aaPredicted RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 ADH5P11766 374 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 PVALBP20472 110 aaPredicted RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 MAD2L1BPQ15013 274 aaPredicted RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 PCBP2Q15366 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
TNC-212ENST00000542877 VMACQ2NL98 169 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 C1orf189Q5VU69 101 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 TXNDC8Q6A555 127 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 MMAAQ8IVH4 418 aaKnown RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 CNIH3Q8TBE1 160 aa12.67□□□□□ -0.38
TNC-212ENST00000542877 TRUB1Q8WWH5 349 aaKnown RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 AKAP1Q92667 903 aaKnown RBP eCLIP12.67□□□□□ -0.38
TNC-212ENST00000542877 NOP16Q9Y3C1 178 aaKnown RBP12.67□□□□□ -0.38
TNC-212ENST00000542877 CCDC85CA6NKD9 419 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 DISC1C4P0D8 188 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 ZNF878C9JN71 531 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 FAAHO00519 579 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 SLC16A5O15375 505 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 FADDQ13158 208 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 GINS1Q14691 196 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 ZNF423Q2M1K9 1284 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 CHERPQ8IWX8 916 aaKnown RBP12.66□□□□□ -0.38
TNC-212ENST00000542877 OR2L8Q8NGY9 312 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 IMP4Q96G21 291 aaKnown RBP12.66□□□□□ -0.38
TNC-212ENST00000542877 CRTAC1Q9NQ79 661 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 SCP2D1Q9UJQ7 156 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 ERVK-11Q9UQG0 969 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 PENKP01210 267 aaPredicted RBP12.66□□□□□ -0.38
TNC-212ENST00000542877 TBRG1Q3YBR2 411 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 UNC50Q53HI1 259 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 PIGGQ5H8A4 983 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 FAM76BQ5HYJ3 339 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 COQ5Q5HYK3 327 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 STEAP4Q687X5 459 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 NRSN1Q8IZ57 195 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 SLC44A3Q8N4M1 653 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 FNDC8Q8TC99 324 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 LRRC15Q8TF66 581 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 TTYH2Q9BSA4 534 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 RHCGQ9UBD6 479 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 ZNF451Q9Y4E5 1061 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 SOCS5O75159 536 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 HOXD8P13378 290 aaPredicted RBP12.66□□□□□ -0.38
TNC-212ENST00000542877 TCEA1P23193 301 aaKnown RBP12.66□□□□□ -0.38
TNC-212ENST00000542877 VAMP1P23763 118 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 GHRHRQ02643 423 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 ZMYND11Q15326 602 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.38
TNC-212ENST00000542877 GXYLT1Q4G148 440 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 TMEM135Q86UB9 458 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 PMM1Q92871 262 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 WDR45Q9Y484 360 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 OARD1Q9Y530 152 aa12.66□□□□□ -0.38
TNC-212ENST00000542877 HSPE1-MOB4S4R3N1 261 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms