RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 TMEM52BQ4KMG9 183 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 TCEAL5Q5H9L2 206 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 GCNT6Q5T4J0 391 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 C9orf64Q5T6V5 341 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 SYT6Q5T7P8 510 aaPredicted RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 RAET1GQ6H3X3 334 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 CRTC3Q6UUV7 619 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 LCTLQ6UWM7 567 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 Q6ZNX1 250 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF366Q8N895 744 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 TRUB1Q8WWH5 349 aaKnown RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 RORBQ92753 470 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF707Q96C28 371 aaPredicted RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PPCDCQ96CD2 204 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 SAMD11Q96NU1 681 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 LRRC3BQ96PB8 259 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 SIGLEC11Q96RL6 698 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 DGCR6LQ9BY27 220 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 THSD1Q9NS62 852 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 EXD2Q9NVH0 621 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 GPATCH2Q9NW75 528 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 DPP7Q9UHL4 492 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 SH2B3Q9UQQ2 575 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 B3GNT3Q9Y2A9 372 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 MRPS23Q9Y3D9 190 aaKnown RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PCDHGA10Q9Y5H3 936 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PTGES3LE9PB15 166 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 K7ESM1 405 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 SLC22A1O15245 554 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 BCAS1O75363 584 aaPredicted RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 INMTO95050 263 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ERGP11308 486 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 CYP4B1P13584 511 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ADRB3P13945 408 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF12P17014 697 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 CD6P30203 668 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 C21orf59P57076 290 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 EEF1A2Q05639 463 aaKnown RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PIGFQ07326 219 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 NPRL3Q12980 569 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 STARD3Q14849 445 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 NPTX1Q15818 432 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF630Q2M218 657 aaPredicted RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 IFI44LQ53G44 452 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 LAIR1Q6GTX8 287 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 TRIM40Q6P9F5 258 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ERN2Q76MJ5 926 aaKnown RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PRSS48Q7RTY5 328 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 FAM124AQ86V42 546 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF547Q8IVP9 402 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 SLC30A8Q8IWU4 369 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 NAGSQ8N159 534 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PARP8Q8N3A8 854 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 C16orf78Q8WTQ4 265 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ING5Q8WYH8 240 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 HSPBAP1Q96EW2 488 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 TPD52L3Q96J77 140 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 SLC35A5Q9BS91 424 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ZDHHC5Q9C0B5 715 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 CCDC90BQ9GZT6 254 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 NECTIN3Q9NQS3 549 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 FAIMQ9NVQ4 179 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 WBP11Q9Y2W2 641 aaKnown RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 COQ6Q9Y2Z9 468 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 LYVE1Q9Y5Y7 322 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PRRT4C9JH25 899 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 C5orf67F2Z3F1 127 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 RGS10O43665 173 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 PFDN1O60925 122 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 SEMA3DO95025 777 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 NFATC1O95644 943 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 C6orf47O95873 294 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 ITGA2P17301 1181 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 RRM2P31350 389 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 FMO3P31513 532 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 MASP1P48740 699 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 BMXP51813 675 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 MAPK10P53779 464 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 IL1RL1Q01638 556 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 SCARB2Q14108 478 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 SPCS2Q15005 226 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 FNDC3BQ53EP0 1204 aaKnown RBP6.27□□□□□ -1.41
PTPRO-208ENST00000542557 CRB2Q5IJ48 1285 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 PRAMEF14Q5SWL7 426 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 PRAMEF13Q5VWM6 474 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 MLIPQ5VWP3 458 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 TRMT11Q7Z4G4 463 aaKnown RBP6.27□□□□□ -1.41
PTPRO-208ENST00000542557 TSEN54Q7Z6J9 526 aaKnown RBP6.27□□□□□ -1.41
PTPRO-208ENST00000542557 PDZD3Q86UT5 571 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 TRIM74Q86UV6 250 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 DCUN1D3Q8IWE4 304 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 KRT78Q8N1N4 520 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 SMYD1Q8NB12 490 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 OR4C15Q8NGM1 316 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 C1orf216Q8TAB5 229 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 MIPOL1Q8TD10 442 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 MAL2Q969L2 176 aa6.27□□□□□ -1.41
PTPRO-208ENST00000542557 NXPE3Q969Y0 559 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms