RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 HTRA4P83105 476 aaPredicted RBP14.18□□□□□ -0.14
DDX55-209ENST00000542286 CREMQ03060 361 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 CDK5R2Q13319 367 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 ZNF691Q5VV52 312 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 ZDHHC20Q5W0Z9 365 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 GRHL2Q6ISB3 625 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 ADGRD2Q7Z7M1 963 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 ATG16L2Q8NAA4 619 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 C11orf24Q96F05 449 aaPredicted RBP14.18□□□□□ -0.14
DDX55-209ENST00000542286 C19orf43Q9BQ61 176 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 ABCG4Q9H172 646 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 IL1RAPQ9NPH3 570 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 MAP4K5Q9Y4K4 846 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 INSL6Q9Y581 213 aa14.18□□□□□ -0.14
DDX55-209ENST00000542286 TMEM229AB2RXF0 380 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 M0R3G1 203 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SLC16A5O15375 505 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 FGBP02675 491 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 FABP3P05413 133 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 HOXA9P31269 272 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 BMPR1AP36894 532 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SLC19A1P41440 591 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 EPHA5P54756 1037 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 RPS26P62854 115 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 MPEG1Q2M385 716 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 CDKL4Q5MAI5 379 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 COMMD6Q7Z4G1 85 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 B3GNT8Q7Z7M8 397 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 HORMAD1Q86X24 394 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 ARMC8Q8IUR7 673 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 RASGRP3Q8IV61 690 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 FAM20CQ8IXL6 584 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SVOPLQ8N434 492 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 OR5AR1Q8NGP9 310 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 C3orf18Q9UK00 162 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 RUVBL1Q9Y265 456 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 A0A0G2JN53 185 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 J3KTA2 159 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 EIF3FO00303 357 aaPredicted RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 LZTS3O60299 673 aaPredicted RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 HPRP00739 348 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 VIPP01282 170 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 KLK1P06870 262 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 GPX2P18283 190 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 PSMB5P28074 263 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SLC13A2Q13183 592 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 C1orf53Q5VUE5 145 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 GPR153Q6NV75 609 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 ERAP2Q6P179 960 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SERPINA11Q86U17 422 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SPPL2AQ8TCT8 520 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 HTRA1Q92743 480 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 MUL1Q969V5 352 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 ZNF707Q96C28 371 aaPredicted RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 DTD2Q96FN9 168 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 ZNF486Q96H40 463 aaPredicted RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 LGR4Q9BXB1 951 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 IL23AQ9NPF7 189 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 RLIMQ9NVW2 624 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SLC23A2Q9UGH3 650 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 PCDHB11Q9Y5F2 797 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 CKAP5Q14008 2032 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 KPNA5O15131 536 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 POP7O75817 140 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 KLHL18O94889 574 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 ANGPTL1O95841 491 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 POU2F1P14859 743 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 GP2P55259 537 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 DCDC1P59894 354 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 ST8SIA6P61647 398 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SRSF11Q05519 484 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 CSTF3Q12996 717 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 USP43Q70EL4 1123 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 TSEN54Q7Z6J9 526 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 PLD3Q8IV08 490 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 NPAS3Q8IXF0 933 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 CHCHD4Q8N4Q1 142 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 PIK3C3Q8NEB9 887 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 OR56A3Q8NH54 315 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 NDNFQ8TB73 568 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 HDAC2Q92769 488 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 KLK6Q92876 244 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 GLMNQ92990 594 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 KCNC2Q96PR1 638 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 THUMPD1Q9NXG2 353 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 USE1Q9NZ43 259 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SPASTQ9UBP0 616 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 MAFFQ9ULX9 164 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 SAMD4AQ9UPU9 718 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 TMA7Q9Y2S6 64 aaKnown RBP14.17□□□□□ -0.14
DDX55-209ENST00000542286 KCNE2Q9Y6J6 123 aa14.17□□□□□ -0.14
DDX55-209ENST00000542286 TRPM6Q9BX84 2022 aa14.16□□□□□ -0.14
DDX55-209ENST00000542286 GON4LQ3T8J9 2241 aa14.16□□□□□ -0.14
DDX55-209ENST00000542286 PRR23AA6NEV1 266 aa14.16□□□□□ -0.14
DDX55-209ENST00000542286 WASHC1A8K0Z3 465 aa14.16□□□□□ -0.14
DDX55-209ENST00000542286 HEPACAM2A8MVW5 462 aa14.16□□□□□ -0.14
DDX55-209ENST00000542286 H0YIV9 168 aa14.16□□□□□ -0.14
DDX55-209ENST00000542286 LILRB5O75023 590 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms