RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 THRBP10828 461 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 VPREB1P12018 145 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CEACAM1P13688 526 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 MPZP25189 248 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ITGA3P26006 1051 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CCR1P32246 355 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 RDXP35241 583 aaKnown RBP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 KRT6CP48668 564 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 SERPINH1P50454 418 aaKnown RBP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 HAND2P61296 217 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 GALK2Q01415 458 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 MFAP5Q13361 173 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 TNK1Q13470 666 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 EFTUD2Q15029 972 aaKnown RBP eCLIP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ZMYND11Q15326 602 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 HADHQ16836 314 aaKnown RBP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 MCMDC2Q4G0Z9 681 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 EPC2Q52LR7 807 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ASPRV1Q53RT3 343 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CFAP157Q5JU67 520 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 C1orf185Q5T7R7 199 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 OR6B2Q6IFH4 312 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CASC4Q6P4E1 433 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 NOTUMQ6P988 496 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CYB5D1Q6P9G0 228 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 MACC1Q6ZN28 852 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 PIGWQ7Z7B1 504 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 TMEM173Q86WV6 379 aaPredicted RBP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ZNF573Q86YE8 665 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 PLD3Q8IV08 490 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 DCLK2Q8N568 766 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 L3MBTL4Q8NA19 623 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 FAM184AQ8NB25 1140 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 BBOF1Q8ND07 529 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 TBC1D16Q8TBP0 767 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 RAPGEF5Q92565 580 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 RAD54LQ92698 747 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 RIT1Q92963 219 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 MOAP1Q96BY2 351 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ERLEC1Q96DZ1 483 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 SPDL1Q96EA4 605 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CCDC51Q96ER9 411 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 EPSTI1Q96J88 318 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 FAM81BQ96LP2 452 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 SPATA33Q96N06 139 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 AGAP3Q96P47 875 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 KLHL5Q96PQ7 755 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 NAP1L3Q99457 506 aaPredicted RBP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 FEVQ99581 238 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 PSD2Q9BQI7 771 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 ZNF577Q9BSK1 485 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 C16orf70Q9BSU1 422 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 RAB33BQ9H082 229 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 WNT5BQ9H1J7 359 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 S1PR5Q9H228 398 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 CARD9Q9H257 536 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 VCPKMTQ9H867 229 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 SRD5A3Q9H8P0 318 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 LRRC40Q9H9A6 602 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 RNPEPL1Q9HAU8 725 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 GPN1Q9HCN4 374 aaPredicted RBP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 RAB9BQ9NP90 201 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 SIX2Q9NPC8 291 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 PPANQ9NQ55 473 aaKnown RBP3.19□□□□□ -1.9
LEMD3-204ENST00000542032 MAD2L2Q9UI95 211 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 PRSS21Q9Y6M0 314 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 SPACA6W5XKT8 324 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 TMEM94Q12767 1356 aa3.19□□□□□ -1.9
LEMD3-204ENST00000542032 GOLGA6L7A0A1B0GV03 622 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 C13orf42A0A1B0GVH6 325 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 C2orf92A0A1B0GVN3 265 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 FAM230AA0A1W2PPH8 454 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 A0A1W2PPQ1 181 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 NCF1BA6NI72 391 aaPredicted RBP3.18□□□□□ -1.9
LEMD3-204ENST00000542032 ZSCAN5BA6NJL1 495 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 SDR42E2A6NKP2 422 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 NCF1CA8MVU1 366 aaPredicted RBP3.18□□□□□ -1.9
LEMD3-204ENST00000542032 E9PBE3 544 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 F8WDY8 70 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 TMEM189-UBE2V1I3L0A0 370 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 CTDSPLO15194 276 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 BUB1O43683 1085 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 GPR137BO60478 399 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 PRAMEF11O60813 436 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 FCGR3BO75015 233 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 HSF2BPO75031 334 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 ZNF821O75541 412 aaPredicted RBP3.18□□□□□ -1.9
LEMD3-204ENST00000542032 ZFAND5O76080 213 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 CAVIN2O95810 425 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 CLPTM1O96005 669 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 KRT8P05787 483 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 S100A9P06702 114 aaKnown RBP3.18□□□□□ -1.9
LEMD3-204ENST00000542032 PLA2G4BP0C869 781 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 POLR2MP0CAP2 368 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 FUT1P19526 365 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 CD22P20273 847 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 PAX7P23759 505 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 DNAJB1P25685 340 aa3.18□□□□□ -1.9
LEMD3-204ENST00000542032 CCND3P30281 292 aaPredicted RBP3.18□□□□□ -1.9
LEMD3-204ENST00000542032 PTGER3P43115 390 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms