RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 C11orf84Q9BUA3 381 aaPredicted RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 UPF3BQ9BZI7 483 aaKnown RBP5.26□□□□□ -1.57
DDB1-219ENST00000541513 AMBRA1Q9C0C7 1298 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 AUNIPQ9H7T9 357 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 SPACA1Q9HBV2 294 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 MMP25Q9NPA2 562 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 NUDT15Q9NV35 164 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 GTSE1Q9NYZ3 720 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 SEMA5BQ9P283 1151 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PLCL2Q9UPR0 1127 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 PADI2Q9Y2J8 665 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 LCTP09848 1927 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 HTTP42858 3142 aa5.26□□□□□ -1.57
DDB1-219ENST00000541513 KIAA0100Q14667 2235 aaKnown RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 A0A087X0K7 114 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 A0A0U1RQF3 1178 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 KLF18A0A0U1RQI7 1052 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 A0A0U1RRA0 63 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 TMEM129A0AVI4 362 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 UBE2QL1A1L167 161 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 A1L4Q6 167 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 MAGEB16A2A368 324 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 HSPB2A8KAH6 182 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 FAM157AC9JC47 383 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 DNAJB6O75190 326 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 NIPSNAP2O75323 286 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ZNF217O75362 1048 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ZNF189O75820 626 aaPredicted RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 CNMDO75829 334 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 OPN1LWP04000 364 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ERBB2P04626 1255 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 CSN3P07498 182 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ANKRD34CP0C6C1 535 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ANXA13P27216 316 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 RAP1GAPP47736 663 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 SLC1A6P48664 564 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 LHX1P48742 406 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ACADVLP49748 655 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 SUMO2P61956 95 aaKnown RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 RPS7P62081 194 aaKnown RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 CBX1P83916 185 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 DMWDQ09019 674 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 FUT7Q11130 342 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 GAB1Q13480 694 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 BTG3Q14201 252 aaPredicted RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 HSPB2Q16082 182 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 MAPK6Q16659 721 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 PLK5Q496M5 336 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 LRRC66Q68CR7 880 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 FBXO42Q6P3S6 717 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 TRMT11Q7Z4G4 463 aaKnown RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 HAPLN4Q86UW8 402 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ECHDC2Q86YB7 292 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 SLC35F3Q8IY50 421 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 OFCC1Q8IZS5 231 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 C1orf87Q8N0U7 546 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 GCNT2Q8N0V5 402 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 UBE2J2Q8N2K1 259 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 RNF10Q8N5U6 811 aaKnown RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 ZBTB2Q8N680 514 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 PAPD5Q8NDF8 572 aaKnown RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 BPIFCQ8NFQ6 507 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 OR9K2Q8NGE7 335 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 CLHC1Q8NHS4 586 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 CHPT1Q8WUD6 406 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 FCGR1BQ92637 280 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 EMG1Q92979 244 aaKnown RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 FBXL8Q96CD0 374 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 LOXL4Q96JB6 756 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 C4orf36Q96KX1 117 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ZNF48Q96MX3 618 aaPredicted RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 GPR78Q96P69 363 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 DDOQ99489 341 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 CHP1Q99653 195 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 IFT27Q9BW83 186 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 SSBP4Q9BWG4 385 aaPredicted RBP5.25□□□□□ -1.57
DDB1-219ENST00000541513 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 WWTR1Q9GZV5 400 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 PIGMQ9H3S5 423 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 R3HDMLQ9H3Y0 253 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 SLC38A10Q9HBR0 1119 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 NEK6Q9HC98 313 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 IL26Q9NPH9 171 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 GPR173Q9NS66 373 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 RHCGQ9UBD6 479 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 CD300AQ9UGN4 299 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 CHMP2BQ9UQN3 213 aa5.25□□□□□ -1.57
DDB1-219ENST00000541513 ZNF536O15090 1300 aa5.24□□□□□ -1.57
DDB1-219ENST00000541513 IQANK1A0A1B0GTG1 560 aa5.24□□□□□ -1.57
DDB1-219ENST00000541513 GOLGA6L4A6NEF3 574 aa5.24□□□□□ -1.57
DDB1-219ENST00000541513 ANKUB1A6NFN9 424 aa5.24□□□□□ -1.57
DDB1-219ENST00000541513 A8MUI8 341 aa5.24□□□□□ -1.57
DDB1-219ENST00000541513 WASH3PC4AMC7 463 aa5.24□□□□□ -1.57
DDB1-219ENST00000541513 AP4M1O00189 453 aa5.24□□□□□ -1.57
DDB1-219ENST00000541513 NDUFAB1O14561 156 aa5.24□□□□□ -1.57
DDB1-219ENST00000541513 TRDMT1O14717 391 aaKnown RBP5.24□□□□□ -1.57
DDB1-219ENST00000541513 FOXN1O15353 648 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms