RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TRAPPC9Q96Q05 1148 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 PANX1Q96RD7 426 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 C17orf62Q9BQA9 187 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 SEMA6AQ9H2E6 1030 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 SLAMF7Q9NQ25 335 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 FAM120CQ9NX05 1096 aaKnown RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 TEX10Q9NXF1 929 aaPredicted RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 ACTR10Q9NZ32 417 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 PCDHGA4Q9Y5G9 962 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 C1orf226A1L170 272 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 GSAPA4D1B5 854 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 AQP12BA6NM10 295 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CTSVO60911 334 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CLEC3AO75596 197 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 C6orf47O95873 294 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 VIPP01282 170 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 MT-ND1P03886 318 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CTSEP14091 401 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 NUDT1P36639 197 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CXCL12P48061 93 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 TRPC1P48995 793 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 NKG7Q16617 165 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 OGFRL1Q5TC84 451 aaPredicted RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CWF19L1Q69YN2 538 aaKnown RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 FBXO42Q6P3S6 717 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 IZUMO2Q6UXV1 221 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 ZNF621Q6ZSS3 439 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 TICAM1Q8IUC6 712 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 AQP12AQ8IXF9 295 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 MFSD9Q8NBP5 474 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 OR2T12Q8NG77 320 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 ZDHHC1Q8WTX9 485 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 GBP5Q96PP8 586 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 ECSITQ9BQ95 431 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 DPH2Q9BQC3 489 aaPredicted RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 PITHD1Q9GZP4 211 aaPredicted RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 DLGAP2Q9P1A6 1054 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 BCAP29Q9UHQ4 241 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 ADGRE2Q9UHX3 823 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 SIT1Q9Y3P8 196 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 AP1M2Q9Y6Q5 423 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CACNA1IQ9P0X4 2223 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 A0A0A6YYD5 115 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 DHRS12A0PJE2 317 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 TLR4O00206 839 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 P2RX6O15547 441 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 CSF2P04141 144 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 ABCB1P08183 1280 aaPredicted RBP11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 NUDT7P0C024 238 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 ENGP17813 658 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 RPS9P46781 194 aaKnown RBP11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 HNRNPFP52597 415 aaKnown RBP11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 AQP4P55087 323 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 CASP9P55211 416 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 HBA1P69905 142 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 TAF11Q15544 211 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 ADPRMQ3LIE5 342 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 TOR1AIP1Q5JTV8 583 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 FAM46DQ8NEK8 389 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 CADM4Q8NFZ8 388 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 DNAJC9Q8WXX5 260 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 FIG4Q92562 907 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 RSC1A1Q92681 617 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 RGMAQ96B86 450 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 MS4A6EQ96DS6 147 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 SARGQ9BW04 601 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 SLC6A16Q9GZN6 736 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 CCM2LQ9NUG4 571 aaPredicted RBP11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 POT1Q9NUX5 634 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 SPASTQ9UBP0 616 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 BTNL2Q9UIR0 455 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 UTS2RQ9UKP6 389 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 ACSL6Q9UKU0 697 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 SPAG17Q6Q759 2223 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 SDK1Q7Z5N4 2213 aa11.69□□□□□ -0.54
AP003559.1-201ENST00000540906 OR2A25A4D2G3 310 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 FAM149AA5PLN7 773 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 FAM220BPB1ANY3 271 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 CLIC1O00299 241 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 CAPN5O15484 640 aaPredicted RBP11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 HCRTR1O43613 425 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 TPST1O60507 370 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 SDC3O75056 442 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 RPSAP08865 295 aaKnown RBP11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 NME1P15531 152 aaKnown RBP11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 TYRP1P17643 537 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 SERPINB1P30740 379 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 CSNK1EP49674 416 aaKnown RBP11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 MAPK12P53778 367 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 RAB8AP61006 207 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 RACK1P63244 317 aaKnown RBP11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 KLC1Q07866 573 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 KIR2DS3Q14952 304 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 CYP51A1Q16850 503 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 MTX3Q5HYI7 312 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 OR4C11Q6IEV9 310 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 TLDC1Q6P9B6 456 aa11.68□□□□□ -0.54
AP003559.1-201ENST00000540906 ENPP6Q6UWR7 440 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms