RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ANKDD1BA6NHY2 528 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 FOXO6A8MYZ6 492 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 STX16-NPEPL1H3BU86 382 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 STX16O14662 325 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 CDC123O75794 336 aaPredicted RBP15.93■□□□□ 0.14
CD9-209ENST00000540891 CYC1P08574 325 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 C8orf89P0DMQ9 161 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 IL10P22301 178 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 EEF1DP29692 281 aaKnown RBP15.93■□□□□ 0.14
CD9-209ENST00000540891 BTN3A2P78410 334 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 RHAGQ02094 409 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 GTF2H2Q13888 395 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 PCOLCEQ15113 449 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 VWA5B1Q5TIE3 1220 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 GRHL2Q6ISB3 625 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 NIPAL1Q6NVV3 410 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 GTF2H2CQ6P1K8 395 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 METTL2BQ6P1Q9 378 aaKnown RBP15.93■□□□□ 0.14
CD9-209ENST00000540891 MED27Q6P2C8 311 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 LANCL3Q6ZV70 420 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 PARP9Q8IXQ6 854 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 CA13Q8N1Q1 262 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 TBC1D20Q96BZ9 403 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 QRFPRQ96P65 431 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 OR1F2PQ96R84 312 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 MS4A8Q9BY19 250 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 ZNF160Q9HCG1 818 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 ZBTB26Q9HCK0 441 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.93■□□□□ 0.14
CD9-209ENST00000540891 ANGPTL3Q9Y5C1 460 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 PCDHGB7Q9Y5F8 929 aa15.93■□□□□ 0.14
CD9-209ENST00000540891 TNPO3Q9Y5L0 923 aaKnown RBP15.93■□□□□ 0.14
CD9-209ENST00000540891 HEMK1Q9Y5R4 338 aaPredicted RBP15.93■□□□□ 0.14
CD9-209ENST00000540891 V9GYY5 206 aaPredicted RBP15.93■□□□□ 0.14
CD9-209ENST00000540891 ZNF462Q96JM2 2506 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 A0A1W2PPM1 405 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 GOLGA8RI6L899 631 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 OR7A17O14581 309 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 PCDH17O14917 1159 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 ERI3O43414 337 aaKnown RBP15.92■□□□□ 0.14
CD9-209ENST00000540891 SLC28A2O43868 658 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 ITGA3P26006 1051 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 HSD17B3P37058 310 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 SLCO1A2P46721 670 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 SKP1P63208 163 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 KLRB1Q12918 225 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 RUNX2Q13950 521 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 HIST2H2ACQ16777 129 aaPredicted RBP15.92■□□□□ 0.14
CD9-209ENST00000540891 MFSD4BQ5TF39 518 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 HIST2H2AA3Q6FI13 130 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 WDR93Q6P2C0 686 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 ABHD17CQ6PCB6 329 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 SH2D5Q6ZV89 423 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 NDUFAF7Q7L592 441 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 PRICKLE2Q7Z3G6 844 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 UBE3DQ7Z6J8 389 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 TDRPQ86YL5 185 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 CYP4X1Q8N118 509 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 RNF175Q8N4F7 328 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 PLPP5Q8NEB5 264 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 OR2L5Q8NG80 312 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 OR7G3Q8NG95 312 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 ACMSDQ8TDX5 336 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 AENQ8WTP8 325 aaKnown RBP15.92■□□□□ 0.14
CD9-209ENST00000540891 VPS50Q96JG6 964 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 NSUN5Q96P11 429 aaKnown RBP15.92■□□□□ 0.14
CD9-209ENST00000540891 F2RL3Q96RI0 385 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 CCDC77Q9BR77 488 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 REXO4Q9GZR2 422 aaKnown RBP15.92■□□□□ 0.14
CD9-209ENST00000540891 ZNF700Q9H0M5 742 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 IPPKQ9H8X2 491 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 CLK4Q9HAZ1 481 aaKnown RBP15.92■□□□□ 0.14
CD9-209ENST00000540891 ZBTB20Q9HC78 741 aaPredicted RBP15.92■□□□□ 0.14
CD9-209ENST00000540891 ANAPC2Q9UJX6 822 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 PCTPQ9UKL6 214 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 TMCO1Q9UM00 188 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 ZNF451Q9Y4E5 1061 aa15.92■□□□□ 0.14
CD9-209ENST00000540891 SPENQ96T58 3664 aaKnown RBP15.91■□□□□ 0.14
CD9-209ENST00000540891 NSG1A0A0A6YYJ2 146 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 IGHV3-20A0A0C4DH32 117 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 A8MT66 165 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 SMIM24O75264 130 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 FHP07954 510 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 CELA2AP08217 269 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 RPS17P08708 135 aaKnown RBP15.91■□□□□ 0.14
CD9-209ENST00000540891 PYGBP11216 843 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 PLA2G16P53816 162 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 NADK2Q4G0N4 442 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 LIPJQ5W064 366 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 ANKRD37Q7Z713 158 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 LCA5Q86VQ0 697 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 RBMXL3Q8N7X1 1067 aaKnown RBP15.91■□□□□ 0.14
CD9-209ENST00000540891 OR52B6Q8NGF0 335 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 EPS8L3Q8TE67 593 aaKnown RBP15.91■□□□□ 0.14
CD9-209ENST00000540891 TSLPQ969D9 159 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 UBE2E3Q969T4 207 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 IMMP1LQ96LU5 166 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 CDK15Q96Q40 435 aa15.91■□□□□ 0.14
CD9-209ENST00000540891 WDR77Q9BQA1 342 aaPredicted RBP15.91■□□□□ 0.14
CD9-209ENST00000540891 EPN3Q9H201 632 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms