RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 KCNU1A8MYU2 1149 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 E9PAM4 449 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 ZZEF1O43149 2961 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 SIGLEC6O43699 453 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 VPS4BO75351 444 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 PROCP04070 461 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 INHBAP08476 426 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 MSH3P20585 1137 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 IL12AP29459 219 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 OR1D2P34982 312 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 PIK3CBP42338 1070 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 ALDH9A1P49189 494 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 VEGFCP49767 419 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 RGS1Q08116 209 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 C10orf120Q5SQS8 335 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 ANKS6Q68DC2 871 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 MTDHQ86UE4 582 aaKnown RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 ATPAF2Q8N5M1 289 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 OR6X1Q8NH79 312 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 TNFRSF14Q92956 283 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX55-206ENST00000539934 IGSF21Q96ID5 467 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 SIGLEC10Q96LC7 697 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 C10orf90Q96M02 699 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 KCNC2Q96PR1 638 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 EBNA1BP2Q99848 306 aaKnown RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 MND1Q9BWT6 205 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 PARD6GQ9BYG4 376 aaPredicted RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 MLXIPLQ9NP71 852 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 SCML1Q9UN30 329 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 NEU3Q9UQ49 428 aa12.14□□□□□ -0.47
DDX55-206ENST00000539934 COPG1Q9Y678 874 aaKnown RBP12.14□□□□□ -0.47
DDX55-206ENST00000539934 COL4A3Q01955 1670 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 MED6O75586 246 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 TBX18O95935 607 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ILF2Q12905 390 aaKnown RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 ILF3Q12906 894 aaKnown RBP eCLIP12.13□□□□□ -0.47
DDX55-206ENST00000539934 TNK1Q13470 666 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 MLC1Q15049 377 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 RSPO4Q2I0M5 234 aaPredicted RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 TEX44Q53QW1 395 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 LIPJQ5W064 366 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 TTC33Q6PID6 262 aaPredicted RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 ATCAYQ86WG3 371 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ZC3H7AQ8IWR0 971 aaKnown RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 MFSD4AQ8N468 514 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 KYQ8NBH2 561 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 BLOC1S5Q8TDH9 187 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 CA5BP1Q8WTZ4 195 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 VAT1Q99536 393 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 C2orf88Q9BSF0 95 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 DHRS4Q9BTZ2 278 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 VN1R3Q9BXE9 311 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 UCK2Q9BZX2 261 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ZBP1Q9H171 429 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 C1orf21Q9H246 121 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 MARCH2Q9P0N8 246 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 CFAP97Q9P2B7 532 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 DOCK4Q8N1I0 1966 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 DOCK6Q96HP0 2047 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 CNOT1A5YKK6 2376 aaKnown RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 FAM47DPA6NHR8 397 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 SLC38A8A6NNN8 435 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ADAM12O43184 909 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ADRB1P08588 477 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ZNF888P0CJ79 500 aaPredicted RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 NR2F1P10589 423 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 EEF1DP29692 281 aaKnown RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 SESN2P58004 480 aaPredicted RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 HTD2P86397 168 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 RPL6Q02878 288 aaKnown RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 CLCQ05315 142 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 CARTPTQ16568 116 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ZNF181Q2M3W8 571 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 FAM214AQ32MH5 1076 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 CCNYL2Q5T2Q4 361 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 DDI2Q5TDH0 399 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 SLC8B1Q6J4K2 584 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 JMJD6Q6NYC1 403 aaPredicted RBP12.13□□□□□ -0.47
DDX55-206ENST00000539934 SLC27A4Q6P1M0 643 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 DCAKDQ8WVC6 231 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ELMO1Q92556 727 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 SIPA1Q96FS4 1042 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ZCCHC4Q9H5U6 513 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 EFCAB1Q9HAE3 211 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 NIT2Q9NQR4 276 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ELOVL2Q9NXB9 296 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 MPP6Q9NZW5 540 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 NDRG3Q9UGV2 375 aa12.13□□□□□ -0.47
DDX55-206ENST00000539934 ATRXP46100 2492 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 NYNRINQ9P2P1 1898 aaKnown RBP12.12□□□□□ -0.47
DDX55-206ENST00000539934 BAHCC1Q9P281 2608 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 SDK1Q7Z5N4 2213 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 A0A1W2PPM1 405 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 SDR42E2A6NKP2 422 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 JCHAINP01591 159 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 HMBSP08397 361 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 CD40LGP29965 261 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 IL12RB1P42701 662 aa12.12□□□□□ -0.47
DDX55-206ENST00000539934 ABCE1P61221 599 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms