RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 C1orf52Q8N6N3 182 aaKnown RBP22.33■■□□□ 1.17
TMEM260-202ENST00000538838 RGMAQ96B86 450 aa22.33■■□□□ 1.17
TMEM260-202ENST00000538838 MAELQ96JY0 434 aaKnown RBP22.33■■□□□ 1.17
TMEM260-202ENST00000538838 NDC1Q9BTX1 674 aa22.33■■□□□ 1.17
TMEM260-202ENST00000538838 ZNF717Q9BY31 904 aaPredicted RBP22.33■■□□□ 1.17
TMEM260-202ENST00000538838 EPN3Q9H201 632 aa22.33■■□□□ 1.17
TMEM260-202ENST00000538838 KCNK13Q9HB14 408 aa22.33■■□□□ 1.17
TMEM260-202ENST00000538838 LRTM1Q9HBL6 345 aa22.33■■□□□ 1.17
TMEM260-202ENST00000538838 LHX9Q9NQ69 397 aa22.33■■□□□ 1.17
TMEM260-202ENST00000538838 DHCR7Q9UBM7 475 aaKnown RBP22.33■■□□□ 1.17
TMEM260-202ENST00000538838 B3GALT1Q9Y5Z6 326 aa22.33■■□□□ 1.17
TMEM260-202ENST00000538838 A0A0G2JND7 137 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 ALOX12P18054 663 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 PRPH2P23942 346 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 IDH3AP50213 366 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 RPL38P63173 70 aaKnown RBP22.32■■□□□ 1.16
TMEM260-202ENST00000538838 NDUFA9Q16795 377 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 MUM1Q2TAK8 710 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.32■■□□□ 1.16
TMEM260-202ENST00000538838 DEFB134Q4QY38 66 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 GARNL3Q5VVW2 1013 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 CPLX4Q7Z7G2 160 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 METTL4Q8N3J2 472 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 KCNC2Q96PR1 638 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 OR52B2Q96RD2 323 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 AKTIPQ9H8T0 292 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 C1orf109Q9NX04 203 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 SLC22A7Q9Y694 548 aa22.32■■□□□ 1.16
TMEM260-202ENST00000538838 NPIPB8E9PQR5 432 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SMIM10L1P0DMW3 83 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SSR2P43308 183 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 EMP3P54852 163 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 FOXC1Q12948 553 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 AP5B1Q2VPB7 878 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 FAM214AQ32MH5 1076 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 ATP6AP1LQ52LC2 224 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 DCAF12Q5T6F0 453 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 CEACAM20Q6UY09 585 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 ZNF793Q6ZN11 406 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 TTLL10Q6ZVT0 673 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 COMMD6Q7Z4G1 85 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 PDSS2Q86YH6 399 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 METTL27Q8N6F8 245 aaPredicted RBP22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SMIM10Q96HG1 83 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 PPP3R2Q96LZ3 170 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 TEFMQ96QE5 360 aaKnown RBP22.31■■□□□ 1.16
TMEM260-202ENST00000538838 TAAR9Q96RI9 348 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SIKE1Q9BRV8 207 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 TMEM120AQ9BXJ8 343 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 ACTR5Q9H9F9 607 aaPredicted RBP22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SRPK3Q9UPE1 567 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 KNTC1P50748 2209 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 A0A0A6YYC8 382 aaPredicted RBP22.31■■□□□ 1.16
TMEM260-202ENST00000538838 ZNF860A6NHJ4 632 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 I3L1I5 382 aaPredicted RBP22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SEC22BO75396 215 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 PRR35P0CG20 571 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 BSGP35613 385 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 BTN3A2P78410 334 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 TGM3Q08188 693 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 ACSM2AQ08AH3 577 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 HERC3Q15034 1050 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SPIN4Q56A73 249 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 C6orf136Q5SQH8 315 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 ACSM2BQ68CK6 577 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 OR4C11Q6IEV9 310 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 LARP4Q71RC2 724 aaKnown RBP eCLIP22.31■■□□□ 1.16
TMEM260-202ENST00000538838 ZFAND4Q86XD8 727 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 AMER3Q8N944 861 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SRFBP1Q8NEF9 429 aaKnown RBP22.31■■□□□ 1.16
TMEM260-202ENST00000538838 OR9A4Q8NGU2 314 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 CHTF18Q8WVB6 975 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 QRFPRQ96P65 431 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 ELAC2Q9BQ52 826 aaKnown RBP22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SLC7A5P2Q9GIP4 190 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 PRDM7Q9NQW5 492 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 KLHL14Q9P2G3 628 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 NDOR1Q9UHB4 597 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 NAALAD2Q9Y3Q0 740 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 PCDHB3Q9Y5E6 796 aa22.31■■□□□ 1.16
TMEM260-202ENST00000538838 SRRM3A6NNA2 597 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-202ENST00000538838 FOXS1O43638 330 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 EEDO75530 441 aaKnown RBP22.3■■□□□ 1.16
TMEM260-202ENST00000538838 KLHL18O94889 574 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 GBAP04062 536 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 NTRK1P04629 796 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 ZNF28P17035 718 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 CERS1P27544 350 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 ARSFP54793 590 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 GABREP78334 506 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 KIAA0040Q15053 153 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 RFTN2Q52LD8 501 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-202ENST00000538838 YOD1Q5VVQ6 348 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-202ENST00000538838 NXNQ6DKJ4 435 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 TBCDQ9BTW9 1192 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 C1orf50Q9BV19 199 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 DDA1Q9BW61 102 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 EBPLQ9BY08 206 aa22.3■■□□□ 1.16
TMEM260-202ENST00000538838 COPS7BQ9H9Q2 264 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-202ENST00000538838 ANKHQ9HCJ1 492 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms