RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ECHS1P30084 290 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 KCNC1P48547 511 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 HSPA7P48741 367 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 AP2B1P63010 937 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 SKP1P63208 163 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 SLBPQ14493 270 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB40B-202ENST00000538809 NSDHLQ15738 373 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 PRAMEF9Q5VWM5 478 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 PLAG1Q6DJT9 500 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 SLCO4C1Q6ZQN7 724 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 CMC1Q7Z7K0 106 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 PDPRQ8NCN5 879 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 ST6GALNAC3Q8NDV1 305 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 TRPV3Q8NET8 790 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 CREB3L4Q8TEY5 395 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 FAR1Q8WVX9 515 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 CCT6BQ92526 530 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 HAS2Q92819 552 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 KIAA1191Q96A73 305 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 ESAMQ96AP7 390 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 TBC1D20Q96BZ9 403 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 FUT8Q9BYC5 575 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 RHBGQ9H310 441 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 KCNK13Q9HB14 408 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 COPG2Q9UBF2 871 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 EML6Q6ZMW3 1958 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 DOPEY1Q5JWR5 2465 aa14.08□□□□□ -0.16
RAB40B-202ENST00000538809 TRAV17A0A0B4J275 112 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 MAGEB17A8MXT2 336 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 SMIM10L1P0DMW3 83 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 C1GALT1C1LP0DN25 315 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 GNAZP19086 355 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 IL10P22301 178 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 OR4D2P58180 307 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 SRSF11Q05519 484 aaKnown RBP14.07□□□□□ -0.16
RAB40B-202ENST00000538809 ACTN3Q08043 901 aaPredicted RBP14.07□□□□□ -0.16
RAB40B-202ENST00000538809 GPSM1Q86YR5 675 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 BEST3Q8N1M1 668 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 SNX31Q8N9S9 440 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 PLPP5Q8NEB5 264 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 ZNF592Q92610 1267 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 SMIM10Q96HG1 83 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 TAAR6Q96RI8 345 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 IGSF5Q9NSI5 407 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 OLAHQ9NV23 265 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 CD274Q9NZQ7 290 aa14.07□□□□□ -0.16
RAB40B-202ENST00000538809 PLEKHB1Q9UF11 243 aaPredicted RBP14.07□□□□□ -0.16
RAB40B-202ENST00000538809 PTBP2Q9UKA9 531 aaKnown RBP14.07□□□□□ -0.16
RAB40B-202ENST00000538809 GTF3C1Q12789 2109 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 OR5H15A6NDH6 313 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 URADA6NGE7 173 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 FAM227AF5H4B4 570 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 KIF2AO00139 706 aaPredicted RBP14.06□□□□□ -0.16
RAB40B-202ENST00000538809 MAN1A2O60476 641 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 SERPINA6P08185 405 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 RNH1P13489 461 aaKnown RBP14.06□□□□□ -0.16
RAB40B-202ENST00000538809 EPORP19235 508 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 MAOAP21397 527 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 JAK1P23458 1154 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 HNRNPH1P31943 449 aaKnown RBP14.06□□□□□ -0.16
RAB40B-202ENST00000538809 BTG2P78543 158 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 E2F2Q14209 437 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 EXT1Q16394 746 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 SULT1C3Q6IMI6 304 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 ADNP2Q6IQ32 1131 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 RPUSD3Q6P087 351 aaKnown RBP14.06□□□□□ -0.16
RAB40B-202ENST00000538809 ISCA2Q86U28 154 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 CRLF3Q8IUI8 442 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 CENPLQ8N0S6 344 aaPredicted RBP14.06□□□□□ -0.16
RAB40B-202ENST00000538809 CYP4X1Q8N118 509 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 CA13Q8N1Q1 262 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 TCAIMQ8N3R3 496 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 BCORP1Q8N888 145 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 MNS1Q8NEH6 495 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 ATOH8Q96SQ7 321 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 LPAR4Q99677 370 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 NPAS2Q99743 824 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 RNF32Q9H0A6 362 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 ACSS3Q9H6R3 686 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 DNAJC11Q9NVH1 559 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 STMN3Q9NZ72 180 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 GPRC5BQ9NZH0 403 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 TEKT2Q9UIF3 430 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 RNF112Q9ULX5 631 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 OSGIN2Q9Y236 505 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 SLC5A6Q9Y289 635 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 ASB1Q9Y576 335 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 CACNA1DQ01668 2161 aa14.06□□□□□ -0.16
RAB40B-202ENST00000538809 PSMD12O00232 456 aaPredicted RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 ERI3O43414 337 aaKnown RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 H2AFYO75367 372 aaKnown RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 TBX6O95947 436 aaPredicted RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 LDLRP01130 860 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 S100BP04271 92 aaPredicted RBP14.05□□□□□ -0.16
RAB40B-202ENST00000538809 CTAGE8P0CG41 777 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 EDN3P14138 238 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 CRABP2P29373 138 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 SLC26A5P58743 744 aa14.05□□□□□ -0.16
RAB40B-202ENST00000538809 STXBP1P61764 594 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms