RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PRKACGP22612 351 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 PTX3P26022 381 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 HTR1BP28222 390 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 BSGP35613 385 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 HPCAL1P37235 193 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 PIK3CBP42338 1070 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 REEP5Q00765 189 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 TDGQ13569 410 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 SPIDRQ14159 915 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 PLCL1Q15111 1095 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 ZIK1Q3SY52 487 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-205ENST00000538545 FAM71E1Q6IPT2 247 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 OR2L3Q8NG85 312 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 MAP4K5Q9Y4K4 846 aa13.49□□□□□ -0.25
ACTN1-205ENST00000538545 KRBA1A5PL33 1030 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 EVPLLA8MZ36 301 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 SOAT1P35610 550 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 ASMTP46597 345 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 MAPK12P53778 367 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 PPP1CAP62136 330 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 ZNF750Q32MQ0 723 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 RNF220Q5VTB9 566 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 TRIM69Q86WT6 500 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 EXOSC8Q96B26 276 aaKnown RBP13.48□□□□□ -0.25
ACTN1-205ENST00000538545 COQ8BQ96D53 544 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 SLC47A1Q96FL8 570 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 OTUB1Q96FW1 271 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-205ENST00000538545 SCARF2Q96GP6 870 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-205ENST00000538545 CENPNQ96H22 339 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-205ENST00000538545 FBRSQ9HAH7 460 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 MIEF1Q9NQG6 463 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 FAM120CQ9NX05 1096 aaKnown RBP13.48□□□□□ -0.25
ACTN1-205ENST00000538545 C1orf226A1L170 272 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 C9P02748 559 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 SRFP11831 508 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 PVRP15151 417 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 POLR2CP19387 275 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-205ENST00000538545 TNFRSF1BP20333 461 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 CRATP43155 626 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 ZNF33BQ06732 778 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 LRIT3Q3SXY7 679 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 PRRT3Q5FWE3 981 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 UGT2A3Q6UWM9 527 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 PRR23BQ6ZRT6 265 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 ZZZ3Q8IYH5 903 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 ANKFN1Q8N957 763 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 OR2L8Q8NGY9 312 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 OR8K5Q8NH50 307 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 TMBIM1Q969X1 311 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 RMI1Q9H9A7 625 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 SPATA7Q9P0W8 599 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 PCDHB11Q9Y5F2 797 aa13.48□□□□□ -0.25
ACTN1-205ENST00000538545 UPK1AO00322 258 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 NDUFS4O43181 175 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 SH3BP5O60239 455 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-205ENST00000538545 PGM3O95394 542 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 CHRNB3Q05901 458 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 FBXO43Q4G163 708 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 TMEM179BQ7Z7N9 219 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 AMIGO1Q86WK6 493 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 OFCC1Q8IZS5 231 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 FAM9CQ8IZT9 166 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 KCT2Q8NC54 265 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 ZFP90Q8TF47 636 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 TM4SF18Q96CE8 201 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 CXorf40BQ96DE9 158 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 FBXL20Q96IG2 436 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 SLC6A18Q96N87 628 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 SH3GL1Q99961 368 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 USP36Q9P275 1121 aaKnown RBP13.47□□□□□ -0.25
ACTN1-205ENST00000538545 FAM220BPB1ANY3 271 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 hCG_2039718K7EN88 272 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 PRICKLE3O43900 615 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-205ENST00000538545 NOBOXO60393 691 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 SMNDC1O75940 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
ACTN1-205ENST00000538545 SNAP29O95721 258 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 LDLRP01130 860 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 MAGP20916 626 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 CRYBA2P53672 197 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 KIAA1024LP59773 190 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 MYBPC1Q00872 1141 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 ABHD18Q0P651 414 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 HSPB3Q12988 150 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 GPR18Q14330 331 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 DPY19L1Q2PZI1 675 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 PTCRAQ6ISU1 281 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-205ENST00000538545 ZNF438Q7Z4V0 828 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 CREB3L4Q8TEY5 395 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 ZNF597Q96LX8 424 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 CCDC115Q96NT0 180 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 BTBD9Q96Q07 612 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 BARD1Q99728 777 aaKnown RBP13.47□□□□□ -0.25
ACTN1-205ENST00000538545 SLC35A5Q9BS91 424 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 GORASP2Q9H8Y8 452 aa13.47□□□□□ -0.25
ACTN1-205ENST00000538545 DCAF13Q9NV06 445 aaKnown RBP13.47□□□□□ -0.25
ACTN1-205ENST00000538545 MAGEA13PA6NCF6 341 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 CLOCKO15516 846 aa13.46□□□□□ -0.25
ACTN1-205ENST00000538545 ERI3O43414 337 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms