RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SLC35F4A4IF30 521 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CLCA1A8K7I4 914 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 ERI2A8K979 691 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CXCR6O00574 342 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PDCD5O14737 125 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 SEC22BO75396 215 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 HTR3BO95264 441 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 DNASE1P24855 282 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 PSMA1P25786 263 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 C21orf33P30042 268 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 LHX1P48742 406 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CLCN4P51793 760 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 C2orf80Q0P641 193 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 KLHL22Q53GT1 634 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 GDPGP1Q6ZNW5 385 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 DUSP18Q8NEJ0 188 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 EXT2Q93063 718 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 C3orf30Q96M34 536 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CCDC115Q96NT0 180 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 CDHR5Q9HBB8 845 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 RGS18Q9NS28 235 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 STUB1Q9UNE7 303 aa10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 FNDC3AQ9Y2H6 1198 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-207ENST00000537408 SLC22A23A1A5C7 686 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 MBLAC1A4D2B0 266 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 MICAL2O94851 1124 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 LINC00032P0C843 101 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 PFKLP17858 780 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 BTG1P62324 171 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 FGL1Q08830 312 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 SF3A2Q15428 464 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 FCN2Q15485 313 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 TEAD4Q15561 434 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 IQCCQ4KMZ1 466 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 C10orf62Q5T681 223 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 MRPL10Q7Z7H8 261 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 MS4A15Q8N5U1 240 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 NARS2Q96I59 477 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 PPP3R2Q96LZ3 170 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 NTPCRQ9BSD7 190 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 FSD1LQ9BXM9 530 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 PDP1Q9P0J1 537 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 UBA6A0AVT1 1052 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 MFSD2BA6NFX1 497 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 C2CD4BA6NLJ0 364 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 SLC28A1O00337 649 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 SNAPC5O75971 98 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 SMIM6P0DI80 62 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 GRK5P34947 590 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 ADRA1BP35368 520 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 PSMD4P55036 377 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 ITGA1P56199 1179 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 DSG2Q14126 1118 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 SH3PXD2AQ5TCZ1 1133 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 FUT10Q6P4F1 479 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.49□□□□□ -0.733e-8■■■□□ 15.7
CLSTN3-207ENST00000537408 OR1M1Q8NGA1 313 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 BCL2L14Q9BZR8 327 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 BRD9Q9H8M2 597 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 ABCB9Q9NP78 766 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 UXTQ9UBK9 157 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 CTSFQ9UBX1 484 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 GIMAP2Q9UG22 337 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 ZNF490Q9ULM2 529 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 MRPS17Q9Y2R5 130 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 IQCMA0A1B0GVH7 501 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 IFRD1O00458 451 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 ADRB1P08588 477 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 SSTR2P30874 369 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 DEFB103AP81534 67 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 EIF4HQ15056 248 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 TECRLQ5HYJ1 363 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 RANBP10Q6VN20 620 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 RPS27LQ71UM5 84 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 KRT74Q7RTS7 529 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 CYP4Z1Q86W10 505 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 RYBPQ8N488 228 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 GANCQ8TET4 914 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 ZDHHC12Q96GR4 267 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 LGMNQ99538 433 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 GABARAPL1Q9H0R8 117 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 NXF3Q9H4D5 531 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 ZIM2Q9NZV7 527 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 SEC14L4Q9UDX3 406 aa10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 NDRG4Q9ULP0 352 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-207ENST00000537408 RBBP6Q7Z6E9 1792 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 AP2A1O95782 977 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 S100A8P05109 93 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 HOXB8P17481 243 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 CAPZA1P52907 286 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 PDSS1Q5T2R2 415 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 Q8N402 240 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 OR8J3Q8NGG0 315 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.48□□□□□ -0.732e-9■■■■■ 63.5
CLSTN3-207ENST00000537408 NSMAFQ92636 917 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 DNASE1L2Q92874 299 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 P2RY11Q96G91 374 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 CELF6Q96J87 481 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 MGLLQ99685 303 aa10.48□□□□□ -0.73
CLSTN3-207ENST00000537408 CRISPLD1Q9H336 500 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms